基于ATAC-seq高精度预测染色质相互作用的新方法和基于增强现实的3D基因组数据可视化

31871331
2018
C0608.生物数据资源与分析方法
张治华
面上项目
研究员
中国科学院北京基因组研究所（国家生物信息中心）
59万元
增强现实;基因组;数据可视化;基因组大数据;3D;人
2019-01-01到2022-12-31
  • 中英文摘要
  • 结题摘要
  • 结题报告
  • 项目成果
  • 项目参与人
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序号 标题 类型 作者
1 Episo: quantitative estimation of RNA 5-methylcytosine at isoform level by high-throughput sequencing of RNA treated with bisulfite 期刊论文 Liu Junfeng;An Ziyang;Luo Jianjun;Li Jing;Li Feifei;Zhang Zhihua
2 DeTOKI identifies and characterizes the dynamics of chromatin TAD-like domains in a single cell 期刊论文 Xiao Li;Guangjie Zeng;Angsheng Li;Zhihua Zhang
3 Delta.AR: An augmented reality-based visualization platform for 3D genome 期刊论文 Bixia Tang;Xiaoxing Li;Guan Li;Dong Tian;Feifei Li;Zhihua Zhang
4 Evidence of constraint in the 3D genome for trans-splicing in human cells 期刊论文 Cong Liu;Yiqun Zhang;Xiaoli Li;Yan Jia;Feifei Li;Jing Li;Zhihua Zhang
5 The asynchronous establishment of chromatin 3D architecture between in vitro fertilized and uniparental preimplantation pig embryos 期刊论文 Feifei Li;Danyang Wang;Ruigao Song;Chunwei Cao;Zhihua Zhang;Yu Wang;Xiaoli Li;Jiaojiao Huang;Qiang Liu;Naipeng Hou;Bingxiang Xu;Xiao Li;Xiaomeng Gao;Yan Jia;Jianguo Zhao;Yanfang Wang
6 A hypothetical model of trans-acting R-loops-mediated promoter-enhancer interactions by Alu elements 期刊论文 Xue Bai;Feifei Li;Zhihua Zhang
7 DeNOPA: decoding nucleosome positions sensitively with sparse ATAC-seq data 期刊论文 Bingxiang Xu;Xiaoli Li;Xiaomeng Gao;Yan Jia;Jing Liu;Feifei Li;Zhihua Zhang
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