基于三代测序全长转录组的特异性Isoform识别方法研究及特征分析

31760316
2017
C0608.生物数据资源与分析方法
谢尚潜
地区科学基金项目
副教授
海南大学
35万元
三代测序;同源异构体;植物;转录组;特征选择
2018-01-01到2021-12-31
  • 中英文摘要
  • 结题摘要
  • 结题报告
  • 项目成果
  • 项目参与人
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序号 标题 类型 作者
1 Genome-Wide Association Studies for Five Forage Quality-Related Traits in Sorghum (Sorghum bicolor L.) 期刊论文 Li Jieqin;Tang Weijie;Zhang Ya-Wen;Chen Kai-Ning;Wang Chenchen;Liu Yanlong;Zhan Qiuwen;Wang Chunming;Wang Shi-Bo;Xie Shang-Qian;Wang Lihua
2 DNA N6-Methyladenosine modification role in transmitted variations from genomic DNA to RNA in Herrania umbratica 期刊论文 Luan Mei-Wei;Chen Wei;Xing Jian-Feng;Xiao Chuan-Le;Chen Ying;Xie Shang-Qian
3 SCSit: A high-efficiency preprocessing tool for single-cell sequencing data from SPLiT-seq. 期刊论文 Luan Mei-Wei;Lin Jia-Lun;Wang Ye-Fan;Liu Yu-Xiao;Xiao Chuan-Le;Wu Rongling;Xie Shang-Qian
4 Distribution Patterns of DNA N6-Methyladenosine Modification in Non-coding RNA Genes. 期刊论文 Yu Li;Xiao-Ming Zhang;Mei-Wei Luan;Jian-Feng Xing;Jianguo Chen;Shang-Qian Xie
5 Genome-wide codon usage pattern analysis reveals the correlation between codon usage bias and gene expression in Cuscuta australis. 期刊论文 Liu Xu-Yuan;Li Yu;Ji Kai-Kai;Zhu Jie;Ling Peng;Zhou Tao;Fan Lan-Ying;Xie Shang-Qian
6 Evaluating Structural Variation Detection Tools for Long-Read Sequencing Datasets in Saccharomyces cerevisiae 期刊论文 Luan Mei-Wei;Zhang Xiao-Ming;Zhu Zi-Bin;Chen Ying;Xie Shang-Qian
7 A protein identification algorithm for tandem mass spectrometry by incorporating the abundance of mRNA into a binomial probability scoring model 期刊论文 Ma Wen-Tai;Liu Zhao-Yu;Chen Xiao-Zhou;Lin Zhen-Liang;Zheng Zhong-Bing;Miao Wei-Guo;Xie Shang-Qian
8 ISOdb: A Comprehensive Database of Full-Length Isoforms Generated by Iso-Seq 期刊论文 Xie Shang-Qian;Han Yue;Chen Xiao-Zhou;Cao Tai-Yu;Ji Kai-Kai;Zhu Jie;Ling Peng;Xiao Chuan-Le
9 DNA N6-Methyladenine Modification in Wild and Cultivated Soybeans Reveals Different Patterns in Nucleus and Cytoplasm 期刊论文 Yuan De-Hui;Xing Jian-Feng;Luan Mei-Wei;Ji Kai-Kai;Guo Jun;Xie Shang-Qian;Zhang Yuan-Ming
10 N6-Methyladenine DNA modification in Xanthomonas oryzae pv. oryzicola genome. 期刊论文 Xiao Chuan-Le;Xie Shang-Qian;Xie Qing-Biao;Liu Zhao-Yu;Xing Jian-Feng;Ji Kai-Kai;Tao Jun;Dai Liang-Ying;Luo Feng
11 N (6)-Methyladenine DNA Modification in the Woodland Strawberry (Fragaria vesca) Genome Reveals a Positive Relationship With Gene Transcription. 期刊论文 Xie Shang-Qian;Xing Jian-Feng;Zhang Xiao-Ming;Liu Zhao-Yu;Luan Mei-Wei;Zhu Jie;Ling Peng;Xiao Chuan-Le;Song Xi-Qiang;Zheng Jun;Chen Ying
12 MDR: an integrative DNA N6-methyladenine and N4-methylcytosine modification database for Rosaceae 期刊论文 Liu Zhao-Yu;Xing Jian-Feng;Chen Wei;Luan Mei-Wei;Xie Rui;Huang Jing;Xie Shang-Qian;Xiao Chuan-Le
13 木兰科叶绿体基因组的密码子使用特征分析 期刊论文 季凯凯;宋希强;陈春国;李革;谢尚潜
14 一种单细胞测序的数据分类方法 专利 谢尚潜;刘宇枭;林加论;邢剑锋
15 基于多组学丰度信息的蛋白质二级质谱鉴定方法 专利 谢尚潜;肖传乐;谢志
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