【91130006】复杂疾病恶化过程相关模式发现理论与方法研究国家自然基金项目

复杂疾病恶化过程相关模式发现理论与方法研究

项目批准号： 91130006

批准年份： 2011

学科分类： A0403.贝叶斯统计与统计应用

项目负责人：高琳

资助类别：重大研究计划

负责人职称：教授

依托单位：西安电子科技大学

资助金额： 75万元

关键词：复杂疾病;数学模型;动态模式;致病基因

起止时间： 2012-01-01到2014-12-31

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序号	标题	类型	作者
1	Biological network analysis: insights into structure and functions	期刊论文	Xiaoke Ma\|Lin Gao\|
2	Seed selection strategy in global network alignment without destroying the entire structures of functional modules	期刊论文	Bingbo Wang\|Lin Gao\|
3	Network-Based Inference Framework for Identifying Cancer Genes from Gene Expression Data	期刊论文	Yang, Bo\|Zhang, Junying\|Yin, Yaling\|Zhang, Yuanyuan\|
4	<span style="font-family:;" roman","serif";font-size:10pt;"="" new="" times="">Identifying Overlapping Mutated Driver Pathways by Constructing Gene Networks in Cancer.</span>	期刊论文	Hao Wu\|Lin Gao\|Feng Li\|Fei Song\|Xiaofei Yang\|
5	Genome-wide identification of significant aberrations in cancer genome	期刊论文	Xiguo Yuan\|Guoqiang Yu\|Xuchu Hou\|Le-Ming Shih\|Robert Clarke\|Junying Zhang\|
6	ppiPre – an R package for predicting protein-protein interactions	会议论文	Yue Deng\|Lin Gao\|
7	<a href="file://D:/motif%20identi%EF%AC%81cation%20based%20on%20local%20based%20on%20local%20structure%20clustering.pdf">Motif Identification based on Local Structure Clustering</a>	会议论文	Junying Zhang\|Yuling Xue\|
8	Quantitative identification of differentially methylated loci based on relative entropy for matched case-control data	期刊论文	Zhang, Yuanyuan\|Zhang, Junying\|Shang, Junliang\|
9	Controllability and observability analysis for vertex domination centrality in directed networks.	期刊论文	Wang, Bingbo\|Gao, Lin\|Gao, Yong\|Deng, Yue\|Wang, Yu\|
10	Identification of putative pathogenic SNPs implied in schizophrenia-associated miRNAs	期刊论文	Sun, Xiaohan\|Zhang, Junying\|
11	Maximizing modularity intensity for community partition and evolution	期刊论文	Sun, Peng Gang\|Gao, Lin\|Yang, Yang\|
12	Weighting links based on edge centrality for community detection	期刊论文	Peng Gang Sun\|
13	<span style="font-family:"Times New Roman","serif";font-size:10pt;">Inferring drug-disease associations based on known protein complexes. </span>	期刊论文	Liang Yu\|Jianbin Huang\|Zhixin Ma\|Jing Zhang\|Yapeng Zou\|Lin Gao\|
14	Long non-coding RNAs function annotation: a global prediction method based on bi-colored networks	期刊论文	Ma, Xiaoke\|Yang, Xiaofei\|Luo, Haitao\|Zhao, Guoguang\|Bu, Dechao\|Jiao, Fei\|Shao, Qixiang\|Chen, RunSheng\|Zhao, Yi\|
15	EpiMiner: A three-stage co-information based method for detecting and visualizing epistatic interactions	期刊论文	Junliang Shang\|Junying Zhang\|Yan Sun\|Yuanke Zhang\|
16	<span style="color: black; font-family: 宋体; font-size: 12pt; mso-font-kerning: 1.0pt; mso-ansi-language: EN-US; mso-fareast-language: ZH-CN; mso-bidi-language: AR-SA; mso-bidi-font-family: "Times New Roman"; mso-ascii-font-family	期刊论文	郭杏莉\|高琳\|刘永轩\|党合萱\|王羽\|杨晓飞\|罗海涛\|
17	Discovering protein complexes in protein interaction networks via exploring the weak ties effect	期刊论文	Xiaoke Ma\|Lin Gao\|
18	Robust data clustering by learning multi-metric Lq-norm distances	期刊论文	Junying Zhang\|Liuqing Peng\|Xiaoxue Zhao\|Ercan E.Kuruoglu\|
19	Detection of deregulated modules using deregulatory linked path.	期刊论文	Hu, Yuxuan\|Lin Gao\|Shi, Kai\|Chiu, David K Y\|
20	<span style="font-family:"Times New Roman","serif";font-size:10pt;">ppiPre-an R package for predicting protein-protein interactions</span>	会议论文	Yue Deng\|Lin Gao\|
21	动态网络模式挖掘方法及其应用	期刊论文	高琳\|杨建业\|覃桂敏\|
22	Control range: a controllability-based index for node significance in directed networks	期刊论文	Bingbo Wang\|Lin Gao\|Yong Gao\|
23	Incorporating heuristic information into ant colony optimization for epistasis detection	期刊论文	Junliang Shang\|Junying Zhang\|Xiujuan Lei\|
24	Detecting Overlapping Protein Complexes by Rough-Fuzzy Clustering in Protein-Protein Interaction Networks	期刊论文	Wu, Hao\|Gao, Lin\|Dong, Jihua\|Yang, Xiaofei\|
25	A minimum resource neural network framework for solving multiconstraint shortest path problems.	期刊论文	Zhang, Junying\|Zhao, Xiaoxue\|He, Xiaotao\|
26	Comparative analysis of methods for identifying recurrent copy number alterations in cancer	期刊论文	Xiguo Yuan\|Junying Zhang\|
27	A network based method for analysis of lncRNA-disease associations and prediction of lncRNAs implicated in diseases	期刊论文	Xiaofei Yang\|Lin Gao\|Xingli Guo\|
28	EpiSIM: simulation of multiple epistasis, linkage disequilibrium patterns and haplotype blocks for genome-wide interaction analysis	期刊论文	Shang, Junliang\|Zhang, Junying\|Lei, Xiujuan\|Zhao, Wenying\|Dong, Yafei\|
29	<span style="font-family:"Times New Roman","serif";font-size:10pt;">Gene selection for cancer classification using sparse representation coefficient and MRMR criterion.</span>	会议论文	Yaojun Geng\|Junying Zhang\|Xiguo Yuan\|Junliang Shang\|
30	Maintain the structural controllability under malicious attacks on directed networks	期刊论文	Wang, Bingbo\|Lin Gao\|Gao, Yong\|Deng, Yue\|
31	Long non-coding RNAs function annotation: a global prediction method based on bi-colored networks	期刊论文	Xingli Guo\|Lin Gao\|Yi Zhao\|
32	Significant substructure discovery in dynamic networks	期刊论文	Qin, Guimin\|Gao, Lin\|Yang, Jianye\|
33	Comparative Analysis of Methods for Identifying Recurrent Copy Number Alterations in Cancer	期刊论文	Yuan, Xiguo\|Zhang, Junying\|Zhang, Shengli\|Yu, Guoqiang\|Wang, Yue\|
34	A Genetic Algorithm to Filter SNPs for SNP Association Study	会议论文	Junying Zhang\|Shengli Jiang\|Xiaoxue Zhao\|
35	An overall-regional competitive self-organizing map neural network for the Euclidean traveling salesman problem	期刊论文	Junying Zhang\|Xuerong Feng\|Bin Zhou\|Dechang Ren\|
36	PLEK: a tool for predicting long non-coding RNAs and messenger RNAs based on an improved k-mer scheme	期刊论文	Li, Aimin\|Zhang, Junying\|Zhou, Zhongyin\|
37	TAGCNA: A Method to Identify Significant Consensus Events of Copy Number Alterations in Cancer	期刊论文	Xiguo Yuan\|Junying Zhang\|Liying Yang\|
38	Weighting links based on edge centrality for community dectection	期刊论文	Peng Gang Sun\|
39	<span style="font-family:" times="" new="" roman","serif";font-size:10pt;"="">HPOSim: an R package for phenotypic similarity measure and enrichment analysis based on the Human Phenotype Ont	期刊论文	Yue Deng\|Lin Gao\|Xiaocheng Huang\|Xingli Guo\|Bingbo Wang\|
40	Anti-triangle centrality-based community detection in complex networks	期刊论文	Jia, Songwei\|Gao, Lin\|Gao, Yong\|Wang, Haiyang\|
41	mirPD: A pattern-based approach for identifying microRNAs from deep sequencing data	期刊论文	Sun, Xiaohan\|Zhang, Junying\|Li, Aimin\|Yuan, Xiguo\|
42	Network-Based Method for Identifying Overlapping Mutated Driver Pathways in Cancer	会议论文	Hao Wu\|Lin Gao\|Feng Li\|Fei Song\|Xiaofei Yang\|
43	<span style="color: red; font-family:;" times="" new="" roman","serif";font-size:10pt;"=""><span style="font-family:;" times="" new="" roman","ser	期刊论文	Songwei Jia\|Lin Gao\|Yong Gao\|James Nastos\|
44	Solving multi-class learning problems via data-driven topology-preserving output codes	期刊论文	Junying Zhang\|Xiaoxue Zhao\|Lan Du\|
45	基于社团检测的复杂网络中心性方法	期刊论文	付立东\|高琳\|马小科\|
46	<a href="file://D:/%E8%AE%BA%E6%96%87/Junying%20Zhang_World%20Intelligent%20Congress%202012_A%20Genetic%20Algorithm%20to%20Filter%20SNPs%20for%20SNP%20Association%20Study.pdf">A Genetic Algorithm to Filter SNPs for SNP Association Study<	会议论文	Junying Zhang\|Shengli Jiang\|Xiaoxue Zhao\|Dan Liu\|
47	Biological network analysis: insights into structure and functions	期刊论文	Ma, Xiaoke\|Gao, Lin\|
48	Controllability and observability analysis for vertex domination centrality in directed networks.	期刊论文	Wang, Bingbo\|Gao, Lin\|Gao, Yong\|Deng, Yue\|Wang, Yu\|

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