【61272339】基于L1范数约束稀疏矩阵分解的基因表达谱数据分析国家自然基金项目

基于L1范数约束稀疏矩阵分解的基因表达谱数据分析

项目批准号： 61272339

批准年份： 2012

学科分类： F0213.生物信息计算与数字健康

项目负责人：郑春厚

资助类别：面上项目

负责人职称：教授

依托单位：安徽大学

资助金额： 80万元

关键词：基因表达谱;L1范数;基因调控网络;转录模块;稀疏矩阵分解

起止时间： 2013-01-01到2016-12-31

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序号	标题	类型	作者
1	An NMF-L2,1-norm Constraint Method for Characteristic Gene Selection	期刊论文	Ying-Lian Gao\|Jiguo Yu\|Chun-Hou Zheng\|Yong Xu\|
2	jNMFMA: a joint non-negative matrix factorization meta-analysias of transcriptomics data	期刊论文	Hongqiang Wang\|Chunhou Zheng\|Xingming Zhao\|
3	A Two-Stage Sparse Selection Method for Extracting Characteristic Genes	会议论文	Jin-Xing Liu\|Chun-Hou Zheng\|Sheng-Jun Li\|Yu-Xia Lei\|
4	Block-Constraint Robust Principal Component Analysis and its Application to Integrated Analysis of TCGA Data	期刊论文	Ying-Lian Gao\|Chun-Hou Zheng\|Yong Xu\|Jiguo Yu\|
5	Tumor Clustering Using Independent Component Analysis and Adaptive Affinity Propagation	会议论文	Jun-Feng Xia\|Yan-Wen Chong\|Yan Zhang\|Chun-Hou Zheng\|
6	RPCA-Based Tumor Classi？cation Using Gene Expression Data	期刊论文	Yong Xu\|Chun-Hou Zheng\|Heng Kong\|Zhi-Hui Lai\|
7	Discovery of Ovarian Cancer Candidate Genes Using Protein Interaction Information	会议论文	RongRong Zhu\|Hai-Tao Li\|Chun-Hou Zheng\|Junfeng Xia\|
8	Identification of ovarian cancer subtype-specific network modules and candidate drivers through an integrative genomics approach	期刊论文	Di Zhang\|Peng Chen\|Chun-Hou Zheng\|Jun-Feng Xia\|
9	Identification of mutated driver pathways in cancer using amulti-objective optimization model	期刊论文	Chunhou Zheng\|Wu Yang\|Yanwen Chong\|Junfeng Xia\|
10	Concordance between somatic copy number loss and downregulated expression: A pan-cancer study of cancer predisposition genes	期刊论文	Ming Zhao\|Chunhou Zheng\|Min Zhao\|Junfeng Xia\|
11	Gene differential coexpression analysis based on biweight correlation and maximum clique	期刊论文	Chun-Hou Zheng\|Lin Yuan\|Wen Sha\|Zhan-Li Sun\|
12	Characteristic Gene Selection based on Robust Graph Regularized Non-negative Matrix Factorization	期刊论文	Jin-Xing Liu\|Ying-Lian Gao\|Chun-Hou Zheng\|Yong Xu\|
13	MGDB:a comprehensive database of genes involved in melanoma	期刊论文	Rongrong Zhu\|Hanqian Zhang\|Chun-HouZheng\|Junfeng Xia\|
14	Sparse Representation for Tumor Classification Based on Feature Extraction Using Latent Low-Rank Representation	期刊论文	Bin Gan\|Chun-Hou Zheng\|Jun Zhang\|Hong-Qiang Wang\|
15	Dimensionality reduction for microarray data using local mean based discriminant analysis	会议论文	Cui, Yan\|Zheng, Chun-Hou\|Yang, Jian\|
16	Simulated Annealing Based Algorithm for Identifying Mutated Driver Pathways in Cancer	期刊论文	Li, Hai-Tao\|Zhang, Yu-Lang\|Zheng, Chun-Hou\|Wang, Hong-Qiang\|
17	Identifiation of driver pathways in cancer based on combinatorial patterns of somatic gene mutations	期刊论文	Haitao Li\|Jun Zhang\|Junfeng Xia\|Chunhou Zheng\|
18	Biweight Midcorrelation-Based Gene Differential Coexpression Analysis and Its Application to Type II Diabetes	会议论文	Lin Yuan\|Wen Sha\|Zhan-Li Sun\|Chun-Hou Zheng\|
19	Differential Expression Analysis on RNA-Seq Count Data Based on Penalized Matrix Decomposition	期刊论文	Gao, Ying-Lian\|Xu, Yong\|Zheng, Chun-Hou\|You, Jane\|
20	A Class-Information-based Sparse Component Analysis Method to Identify Differentially Expressed Genes on RNA-Seq Data	期刊论文	Ying-Lian Gao\|Chun-Hou Zheng\|Dong Wang\|Qi Zhu\|
21	Cancer genes discovery based on integtating transcriptomic data and the impact of gene length transcriptomic data and the impact of gene length	会议论文	Pi-Jing Wei\|Di Zhang\|Chun-Hou Zheng\|Jun-Feng Xia\|
22	Identification of ovarian cancer subtype-specific network modules and candidate drivers through an integrative genomics approach	期刊论文	Di Zhang\|Peng Chen\|Chunhou Zheng\|Junfeng Xia\|
23	Semi-supervised Feature Extraction for RNA-Seq Data Analysis	会议论文	Ying-Lian Gao\|Dong Wang\|Chun-Hou Zheng\|Jun-Liang Shang\|
24	Simulated Annealing Based Algorithm for Mutated Driver Pathways Detecting	会议论文	Hai-Tao Li\|Ai-Xin Guo\|Wen Sha\|Chun-Hou Zheng\|
25	Metasample-Based Robust Sparse Representation for Tumor Classification	期刊论文	Bin Gan\|Chun-Hou Zheng\|Jin-Xin Liu\|
26	A Simple Review of Sparse Principal Components Analysis	会议论文	Ying-Lian Gao\|Jin-Xing Liu\|Chun-Hou Zheng\|Sheng-Jun Li\|
27	Multi-objective Optimization Method for Identifying Mutated Driver Pathways in Cancer	会议论文	Wu Yang\|Junfeng Xia\|Yan Zhang\|Chun-Hou Zheng\|
28	Comparison of Non-negative Matrix Factorization Methods for Clustering Genomic Data	会议论文	Ying-Lian Gao\|Jin-Xing Liu\|Jun-Liang Shang\|Chun-Hou Zheng\|

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