| 1 |
The Topology and Dynamics of Protein Complexes: Insights from Intra-Molecular Network Theory
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期刊论文 |
Zhou, Jianhong|Yan, Wenying|Chen, Jiajia|Shen, Bairong| |
| 2 |
Integrative analysis reveals disease-associated genes and biomarkers for prostate cancer progression
|
期刊论文 |
Chen, Luonan|Chen, Luonan|Shen, Bairong|Shen, Bairong| |
| 3 |
The construction of an amino acid network for understanding protein structure and function
|
期刊论文 |
Hu, Guang|Hu, Guang|Shen, Bairong|Shen, Bairong| |
| 4 |
The construction of an amino acid network for understanding protein structure and function
|
期刊论文 |
Hu, Guang|Hu, Guang|Shen, Bairong|Shen, Bairong| |
| 5 |
Key regulators in prostate cancer identified by co-expression module analysis.
|
期刊论文 |
Zhao Z|Zhao Z|Shen B.|Shen B.| |
| 6 |
Deciphering oncogenic drivers: from single genes to integrated pathways
|
期刊论文 |
M. Sun|M. Sun|B. Shen|B. Shen| |
| 7 |
Clear cell renal cell carcinoma associated microRNA expression signatures identified by an integrated bioinformatics analysis
|
期刊论文 |
Guo, Lingchuan|Guo, Lingchuan|Shen, Bairong|Shen, Bairong| |
| 8 |
3 Evaluation and Comparison of Multiple Aligners for Next-Generation Sequencing Data Analysis
|
期刊论文 |
Zhang, Wenyu|Zhang, Wenyu|Shen, Bairong|Shen, Bairong| |
| 9 |
Identifying novel glioma associated pathways based on systems biology level meta-analysis
|
期刊论文 |
Hu, Guang|Hu, Guang|Shen, Bairong|Shen, Bairong| |
| 10 |
Molecular Signature of Cancer at Gene Level or Pathway Level? Case Studies of Colorectal Cancer and Prostate Cancer Microarray Data
|
期刊论文 |
Shen, Bairong|Shen, Bairong|Zhang, Daqing|Zhang, Daqing| |
| 11 |
Biomedical text mining and its applications in cancer research
|
期刊论文 |
Vongsangnak, Wanwipa|Vongsangnak, Wanwipa|Shen, Bairong|Shen, Bairong| |
| 12 |
Amino Acid Network for the Discrimination of Native Protein Structures from Decoys
|
期刊论文 |
Hu, Guang|Hu, Guang|Shen, Bairong|Shen, Bairong| |
| 13 |
Amino Acid Network for the Discrimination of Native Protein Structures from Decoys
|
期刊论文 |
Hu, Guang|Hu, Guang|Shen, Bairong|Shen, Bairong| |
| 14 |
Key regulators in prostate cancer identified by co-expression module analysis.
|
期刊论文 |
Zhao Z|Zhao Z|Shen B.|Shen B.| |
| 15 |
Biomedical text mining and its applications in cancer research
|
期刊论文 |
Vongsangnak, Wanwipa|Vongsangnak, Wanwipa|Shen, Bairong|Shen, Bairong| |
| 16 |
Identification and Functional Annotation of Genome-Wide ER-Regulated Genes in Breast Cancer Based on ChIP-Seq Data
|
期刊论文 |
Shen, Bairong|Shen, Bairong|Xu, Zhonghua|Xu, Zhonghua| |
| 17 |
Identification of novel microRNA regulatory pathways associated with heterogeneous prostate cancer
|
期刊论文 |
Kaipia, Antti|Kaipia, Antti|Shen, Bairong|Shen, Bairong| |
| 18 |
Combined SVM-CRFs for Biological Named Entity Recognition with Maximal Bidirectional Squeezing
|
期刊论文 |
Zhu, Fei|Shen, Bairong| |
| 19 |
Discovery and characterization of long intergenic non-coding RNAs (lincRNA) module biomarkers in prostate cancer: an integrative analysis of RNA-Seq data
|
期刊论文 |
Z. Zhao|Z. Zhao|B. Shen|B. Shen| |
| 20 |
SVR_CAF: An integrated score function for detecting native protein structures among decoys
|
期刊论文 |
Hu, Guang|Hu, Guang|Shen, Bairong|Shen, Bairong| |
| 21 |
Top associated SNPs in prostate cancer are significantly enriched in cis-expression quantitative trait loci and at transcription factor binding sites.
|
期刊论文 |
Shen B|Shen B|Zhao Z.|Zhao Z.| |
| 22 |
MicroRNA biomarker identification for pediatric acute myeloid leukemia based on a novel bioinformatics model
|
期刊论文 |
Shaoyan Hu|Shaoyan Hu|Bairong Shen|Bairong Shen| |
| 23 |
Screening key microRNAs for castration-resistant prostate cancer based on miRNA/mRNA functional synergistic network
|
期刊论文 |
D. Yang|D. Yang|B. Shen|B. Shen| |
| 24 |
Clear cell renal cell carcinoma associated microRNA expression signatures identified by an integrated bioinformatics analysis
|
期刊论文 |
Guo, Lingchuan|Guo, Lingchuan|Shen, Bairong|Shen, Bairong| |
| 25 |
Identification of novel microRNA regulatory pathways associated with heterogeneous prostate cancer
|
期刊论文 |
Kaipia, Antti|Kaipia, Antti|Shen, Bairong|Shen, Bairong| |
| 26 |
Post genome-wide association studies functional characterization of prostate cancer risk loci
|
期刊论文 |
Hu, Guang|Hu, Guang|Shen, Bairong|Shen, Bairong| |
| 27 |
3 Evaluation and Comparison of Multiple Aligners for Next-Generation Sequencing Data Analysis
|
期刊论文 |
Zhang, Wenyu|Zhang, Wenyu|Shen, Bairong|Shen, Bairong| |
| 28 |
Understanding Amino Acid Mutations in Hepatitis B Virus Proteins for Rational Design of Vaccines and Drugs
|
期刊论文 |
Z. Jiang|Z. Jiang|B. Shen|B. Shen| |
| 29 |
Segmentation of Neuronal Structures Using SARSA (lambda)-Based Boundary Amendment with Reinforced Gradient-Descent Curve Shape Fitting
|
期刊论文 |
Fu, Yuchen|Fu, Yuchen|Shen, Bairong|Shen, Bairong| |
| 30 |
Post genome-wide association studies functional characterization of prostate cancer risk loci
|
期刊论文 |
Hu, Guang|Hu, Guang|Shen, Bairong|Shen, Bairong| |
| 31 |
Translational Bioinformatics for Diagnostic and Prognostic Prediction of Prostate Cancer in the Next-Generation Sequencing Era
|
期刊论文 |
Yang, Dongrong|Yang, Dongrong|Shen, Bairong|Shen, Bairong| |
| 32 |
SVR_CAF: An integrated score function for detecting native protein structures among decoys
|
期刊论文 |
Hu, Guang|Hu, Guang|Shen, Bairong|Shen, Bairong| |
| 33 |
Segmentation of Neuronal Structures Using SARSA (lambda)-Based Boundary Amendment with Reinforced Gradient-Descent Curve Shape Fitting
|
期刊论文 |
Fu, Yuchen|Fu, Yuchen|Shen, Bairong|Shen, Bairong| |
| 34 |
Integrative analysis reveals disease-associated genes and biomarkers for prostate cancer progression
|
期刊论文 |
Chen, Luonan|Chen, Luonan|Shen, Bairong|Shen, Bairong| |
| 35 |
Identifying novel glioma associated pathways based on systems biology level meta-analysis
|
期刊论文 |
Hu, Guang|Hu, Guang|Shen, Bairong|Shen, Bairong| |
| 36 |
Structure-based prediction of the effects of a missense variant on protein stability
|
期刊论文 |
Chen, Biao|Tan, Ge|Vihinen, Mauno|Shen, Bairong| |
| 37 |
Amino Acid Network for the Discrimination of Native Protein Structures from Decoys
|
期刊论文 |
Hu, Guang|Hu, Guang|Shen, Bairong|Shen, Bairong| |
| 38 |
Understanding Amino Acid Mutations in Hepatitis B Virus Proteins for Rational Design of Vaccines and Drugs
|
期刊论文 |
Z. Jiang|Z. Jiang|B. Shen|B. Shen| |
| 39 |
A Systems Biology Perspective on Rational Design of Peptide Vaccine Against Virus Infections
|
期刊论文 |
Chen, Jiajia|Wang, Ying|Guo, Deyin|Shen, Bairong| |
| 40 |
Translational Biomedical Informatics in the Cloud: Present and Future
|
期刊论文 |
Yan, Wenying|Yan, Wenying|Shen, Bairong|Shen, Bairong| |
| 41 |
Molecular Dynamic Simulation to Explore the Molecular Basis of Btk-PH Domain Interaction with Ins(1,3,4,5)P4
|
期刊论文 |
Sun, Maomin|Luo, Cheng|Shen, Bairong|Hu, Guang| |
| 42 |
Identification and Functional Annotation of Genome-Wide ER-Regulated Genes in Breast Cancer Based on ChIP-Seq Data
|
期刊论文 |
Shen, Bairong|Shen, Bairong|Xu, Zhonghua|Xu, Zhonghua| |
| 43 |
Translational Bioinformatics for Diagnostic and Prognostic Prediction of Prostate Cancer in the Next-Generation Sequencing Era
|
期刊论文 |
Yang, Dongrong|Yang, Dongrong|Shen, Bairong|Shen, Bairong| |
| 44 |
Discovery and characterization of long intergenic non-coding RNAs (lincRNA) module biomarkers in prostate cancer: an integrative analysis of RNA-Seq data
|
期刊论文 |
Z. Zhao|Z. Zhao|B. Shen|B. Shen| |
| 45 |
Translational Biomedical Informatics in the Cloud: Present and Future
|
期刊论文 |
Yan, Wenying|Yan, Wenying|Shen, Bairong|Shen, Bairong| |
| 46 |
Top associated SNPs in prostate cancer are significantly enriched in cis-expression quantitative trait loci and at transcription factor binding sites.
|
期刊论文 |
Shen B|Shen B|Zhao Z.|Zhao Z.| |
| 47 |
New genes drive the evolution of gene interaction networks in the human and mouse genomes
|
期刊论文 |
B. Shen|B. Shen|M. Long|M. Long| |
| 48 |
Identification of novel microRNA regulatory pathways associated with heterogeneous prostate cancer
|
期刊论文 |
Kaipia, Antti|Kaipia, Antti|Shen, Bairong|Shen, Bairong| |
| 49 |
Deciphering oncogenic drivers: from single genes to integrated pathways
|
期刊论文 |
M. Sun|M. Sun|B. Shen|B. Shen| |
| 50 |
Amino acid contact energy networks impact protein structure and evolution
|
期刊论文 |
Chen, Biao|Chen, Biao|Shen, Bairong|Shen, Bairong| |
| 51 |
Amino Acid Network for the Discrimination of Native Protein Structures from Decoys
|
期刊论文 |
Hu, Guang|Hu, Guang|Shen, Bairong|Shen, Bairong| |
| 52 |
Molecular Signature of Cancer at Gene Level or Pathway Level? Case Studies of Colorectal Cancer and Prostate Cancer Microarray Data
|
期刊论文 |
Shen, Bairong|Shen, Bairong|Zhang, Daqing|Zhang, Daqing| |
| 53 |
Amino acid contact energy networks impact protein structure and evolution
|
期刊论文 |
Chen, Biao|Chen, Biao|Shen, Bairong|Shen, Bairong| |
| 54 |
Performance comparison and evaluation of software tools for microRNA deep-sequencing data analysis
|
期刊论文 |
Liu, Feng|Vongsangnak, Wanwipa|Jing, Qing|Shen, Bairong| |
| 55 |
Identification of novel microRNA regulatory pathways associated with heterogeneous prostate cancer
|
期刊论文 |
Kaipia, Antti|Kaipia, Antti|Shen, Bairong|Shen, Bairong| |
| 56 |
Screening key microRNAs for castration-resistant prostate cancer based on miRNA/mRNA functional synergistic network
|
期刊论文 |
D. Yang|D. Yang|B. Shen|B. Shen| |
| 57 |
Identification of candidate miRNA biomarkers from miRNA regulatory network with application to prostate cancer
|
期刊论文 |
Guo, Feng|Guo, Feng|Shen, Bairong|Shen, Bairong| |
| 58 |
Identification of candidate miRNA biomarkers from miRNA regulatory network with application to prostate cancer
|
期刊论文 |
Guo, Feng|Guo, Feng|Shen, Bairong|Shen, Bairong| |
| 59 |
New genes drive the evolution of gene interaction networks in the human and mouse genomes
|
期刊论文 |
B. Shen|B. Shen|M. Long|M. Long| |
| 60 |
MicroRNA biomarker identification for pediatric acute myeloid leukemia based on a novel bioinformatics model
|
期刊论文 |
Shaoyan Hu|Shaoyan Hu|Bairong Shen|Bairong Shen| |
