| 1 |
一种基于相关性优化和免疫富集的lncRNA特征识别方法
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专利 |
高美虹;尚学群 |
| 2 |
A web tool for tissue-specific gene ontology enrichment
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会议论文 |
Jiajie Peng;Guilin Lu;Hansheng Xue;Xuequn Shang |
| 3 |
Hierarchical Similarity Network Fusion for Discovering Cancer Subtypes
|
会议论文 |
Shuhui Liu;Xuequn Shang |
| 4 |
R-CRISPR: A Deep Learning Network to Predict Off-Target Activities with Mismatch, Insertion and Deletion in CRISPR-Cas9 System
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期刊论文 |
Rui Niu;Jiajie Peng;Zhipeng Zhang;Xuequn Shang |
| 5 |
A learning-based framework for miRNA-disease association identification using neural networks
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期刊论文 |
Peng Jiajie;Hui Weiwei;Li Qianqian;Chen Bolin;Hao Jianye;Jiang Qinghua;Shang Xuequn;Wei Zhongyu |
| 6 |
A Similarity Regression Fusion Model for Integrating Multi-Omics Data to Identify Cancer Subtypes
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期刊论文 |
Yang Guo;Jianning Zheng;Xuequn Shang |
| 7 |
Twadn: an efficient alignment algorithm based on time warping for pairwise dynamic networks
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期刊论文 |
Yuanke Zhong;Jing Li;Junhao He;Yiqun Gao;Jie Liu;Jingru Wang;Xuequn Shang;Jialu Hu |
| 8 |
A fast and efficient count-based matrix factorization method for detecting cell types from single-cell RNAseq data
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期刊论文 |
Sun Shiquan;Chen Yabo;Liu Yang;Shang Xuequn |
| 9 |
A network-based method for brain disease gene prediction by integrating brain connectome and molecular network
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期刊论文 |
Wei Wang;Ruijiang Han;Menghan Zhang;Yuxian Wang;Tao Wang;Yongtian Wang;Xuequn Shang;Jiajie Peng |
| 10 |
Towards Gene Function Prediction via Multi-Networks Representation Learning
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会议论文 |
Xue Hansheng;Peng Jiajie;Shang Xuequn |
| 11 |
Predicting Parkinson's Disease Genes Based on Node2vec and Autoencoder
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期刊论文 |
Peng Jiajie;Guan Jiaojiao;Shang Xuequn |
| 12 |
Combining gene ontology with deep neural networks to enhance the clustering of single cell RNA-Seq data
|
期刊论文 |
Peng Jiajie;Wang Xiaoyu;Shang Xuequn |
| 13 |
A Machine Learning Based Method to Identify Differentially Expressed Gene
|
会议论文 |
Bolin Chen;Li Gao;Xuequn Shang |
| 14 |
A functional network construction method to interpret the pathological process of colorectal cancer
|
期刊论文 |
Bolin Chen;Manting Yang;Li Gao;Tao Jiang;Xuequn Shang |
| 15 |
Weakly Supervised Group Mask Network for Object Detection
|
期刊论文 |
Lingyun Song;Jun Liu;Mingxuan Sun;Xuequn Shang |
| 16 |
基于网络表示学习的表型关联关系分析方法
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专利 |
彭佳杰;惠薇薇;管姣姣;尚学群 |
| 17 |
Integrating multi-network topology for gene function prediction using deep neural networks
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期刊论文 |
Peng Jiajie;Xue Hansheng;Wei Zhongyu;Tuncali Idil;Hao Jianye;Shang Xuequn |
| 18 |
Identification and Analysis of Genes Involved in Stages of Colon Cancer
|
会议论文 |
Bolin Chen;Teng Wang;Xuequn Shang |
| 19 |
一种基于RNA表达值和二级结构的相关性融合方法
|
专利 |
高美虹;尚学群 |
| 20 |
MD-SVM: a novel SVM-based algorithm for the motif discovery of transcription factor binding sites
|
期刊论文 |
Hu Jialu;Wang Jingru;Lin Jianan;Liu Tianwei;Zhong Yuanke;Liu Jie;Zheng Yan;Gao Yiqun;He Junhao;Shang Xuequn |
| 21 |
MiteFinder II: a novel tool to identify miniature inverted-repeat transposable elements hidden in eukaryotic genomes
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期刊论文 |
Jialu Hu;Yan Zheng;Xuequn Shang |
| 22 |
BCDForest: a boosting cascade deep forest model towards the classification of cancer subtypes based on gene expression data
|
期刊论文 |
Yang Guo;Shuhui Liu;Zhanhuai Li;Xuequn Shang |
| 23 |
Predicting disease-related phenotypes using an integrated phenotype similarity measurement based on HPO
|
期刊论文 |
Xue Hansheng;Peng Jiajie;Shang Xuequn |
| 24 |
A novel subnetwork representation learning method for uncovering disease-disease relationships
|
期刊论文 |
JiajiePenga;JiaojiaoGuan;WeiweiHui;XuequnShang |
| 25 |
基于小样本的多组学数据中基因型与表型关联分析方法
|
专利 |
郭新鹏;宋亚飞;刘帅忱;刘树慧;王艺菲;尚学群 |
| 26 |
TS-GOEA: a web tool for tissue-specific gene set enrichment analysis based on gene ontology
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期刊论文 |
Peng Jiajie;Lu Guilin;Xue Hansheng;Wang Tao;Shang Xuequn |
| 27 |
A novel algorithm based on bi-random walks to identify disease-related lncRNAs
|
期刊论文 |
Hu Jialu;Gao Yiqun;Li Jing;Zheng Yan;Wang Jingru;Shang Xuequn |
| 28 |
A novel method for predicting cell abundance based on single-cell RNA-seq data
|
期刊论文 |
Jiajie Peng;Lu Han;Xuequn Shang |
| 29 |
Predicting Stage-Specific Recurrent Aberrations From Somatic Copy Number Dataset
|
期刊论文 |
Aouiche Chaima;Chen Bolin;Shang Xuequn |
| 30 |
WebNetCoffee: a web-based application to identify functionally conserved proteins from Multiple PPI networks
|
期刊论文 |
Jialu Hu;Yiqun Gao;Junhao He;Yan Zheng;Xuequn Shang |
| 31 |
SCC: an accurate imputation method for scRNA-seq dropouts based on a mixture model
|
期刊论文 |
Yan Zheng;Yuanke Zhong;Jialu Hu;Xuequn Shang |
| 32 |
Deep Subspace Similarity Fusion for the Prediction of Cancer Subtypes
|
会议论文 |
Bo Yang;Shuhui Liu;Shanmin Pang;Chenpai Pang;Xuequn Shang |
| 33 |
Predicting stage-specific cancer related genes and their dynamic modules by integrating multiple datasets
|
期刊论文 |
Aouiche Chaima;Chen Bolin;Shang Xuequn |
| 34 |
Integrating Multiple Datasets to Discover Stage-Specific Cancer Related Genes and Stage-Specific Pathways
|
会议论文 |
Bolin Chen;Chaima Aouiche;Xuequn Shang |
| 35 |
Identifying emerging phenomenon in long temporal phenotyping experiments
|
期刊论文 |
Peng Jiajie;Lu Junya;Hoh Donghee;Dina Ayesha S.;Shang Xuequn;Kramer David M.;Chen Jin |
| 36 |
Identifying functional evolution processes of cancer according to regression residuals network
|
会议论文 |
Bolin Chen;Manting Yang;Xuequn Shang |
| 37 |
Copy number variation related disease genes
|
期刊论文 |
Chaima Aouiche;Xuequn Shang;Bolin Chen |
| 38 |
Multidocument Arabic Text Summarization Based on Clustering and Word2Vec to Reduce Redundancy
|
期刊论文 |
Samer Abdulateef;Naseer Ahmed Khan;Bolin Chen;Xuequn Shang |
| 39 |
Linking genotype to phenotype in multi-omics data of small sample
|
期刊论文 |
Xinpeng Guo;Yafei Song;Shuhui Liu;Meihong Gao;Yang Qi;Xuequn Shang |
| 40 |
Integrating Multi-Network Topology via Deep Semi-supervised Node Embedding
|
会议论文 |
Hansheng Xue;Jiajie Peng;Jiying Li;Xuequn Shang |
| 41 |
DCAE: Selecting Discriminative Genes on Single-cell RNA-seq Data for Cell-type Quantification
|
会议论文 |
Shuhui Liu;Yupei Zhang;Jiajie Peng;Xuequn Shang |
| 42 |
Deep Learning Enables Accurate Prediction of Interplay Between lncRNA and Disease
|
期刊论文 |
Hu Jialu;Gao Yiqun;Li Jing;Shang Xuequn |
| 43 |
基于时序数据的表型本体构建方法
|
专利 |
彭佳杰;卢俊雅;王晓昱;尚学群 |
| 44 |
Integrating Multi-Omic Data with Deep Subspace Fusion Clustering for Cancer Subtype Prediction
|
期刊论文 |
Bo Yang;Yupei Zhang;Shanmin Pang;Xuequn Shang;Xueqing Zhao;Minghui Han |
| 45 |
ProTICS reveals prognostic impact of tumor infiltrating immune cells in different molecular subtypes
|
期刊论文 |
Shuhui Liu;Yupei Zhang;Xuequn Shang;Zhaolei Zhang |
| 46 |
A versatile and scalable single-cell data integration algorithm based on domain-adversarial and variational approximation
|
期刊论文 |
Jialu Hu;Yuanke Zhong;Xuequn Shang |
| 47 |
Identifying Differentially Expressed Genes Based on Differentially Expressed Edges
|
会议论文 |
Bolin Chen;Li Gao;Xuequn Shang |
| 48 |
Identification of cancer subtypes by integrating multiple types of transcriptomics data with deep learning in breast cancer
|
期刊论文 |
Guo Yang;Shang Xuequn;Li Zhanhuai |
| 49 |
A two-way rectification method for identifying differentially expressed genes by maximizing the co-function relationship
|
期刊论文 |
Bolin Chen;Li Gao;Xuequn Shang |
| 50 |
Deep learning-based classification and mutation prediction from histopathological images of hepatocellular carcinoma
|
期刊论文 |
Liao Haotian;Long Yuxi;Han Ruijiang;Wang Wei;Xu Lin;Liao Mingheng;Zhang Zhen;Wu Zhenru;Shang Xuequn;Li Xuefeng;Peng Jiajie;Yuan Kefei;Zeng Yong |
| 51 |
Identification of lncRNA-disease association using bi-random walks
|
会议论文 |
Yiqun Gao;Jialu Hu;Xuequn Shang |
| 52 |
A flexible network-based imputing-and-fusing approach towards the identification of cell types from single-cell RNA-seq data
|
期刊论文 |
Yang Qi;Yang Guo;Huixin Jiao;Xuequn Shang |
| 53 |
Identifying Disease Related Genes by Network Representation and Convolutional Neural Network
|
期刊论文 |
Bolin Chen;Yourui Han;Xuequn Shang;Shenggui Zhan |
