蛋白质异常定位组的计算预测

61872268
2018
F0213.生物信息计算与数字健康
杜朴风
面上项目
副教授
天津大学
64万元
生物信息学;蛋白质相互作用网络;蛋白质亚细胞定位
2019-01-01到2022-12-31
  • 中英文摘要
  • 结题摘要
  • 结题报告
  • 项目成果
  • 项目参与人
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序号 标题 类型 作者
1 dbEssLnc: A manually curated database of human and mouse essential lncRNA genes 期刊论文 Ying-Ying Zhang;Wen-Ya Zhang;Xiao-Hong Xin;Pu-Feng Du
2 NPI-RGCNAE: Fast Predicting ncRNA-Protein Interactions Using the Relational Graph Convolutional Network Auto-Encoder 期刊论文 Han Yu;Zi-Ang Shen;Pu-Feng Du
3 DPPN-SVM: Computational Identification of Mis-Localized Proteins in Cancers by Integrating Differential Gene Expressions With Dynamic Protein-Protein Interaction Networks 期刊论文 Guang-Ping Li;Pu-Feng Du;Zi-Ang Shen;Hang-Yu Liu;Tao Luo
4 Predicting lncRNA–Protein Interactions With miRNAs as Mediators in a Heterogeneous Network Model 期刊论文 Yuan-Ke Zhou;Zi-Ang Shen;Han Yu;Tao Luo;Yang Gao;Pu-Feng Du
5 LPI-SKF: Predicting lncRNA-Protein Interactions Using Similarity Kernel Fusions 期刊论文 Yuan-Ke Zhou;Jie Hu;Zi-Ang Shen;Wen-Ya Zhang;Pufeng Du
6 Predicting LncRNA Subcellular Localization Using Unbalanced Pseudo-k Nucleotide Compositions 期刊论文 Xiao-Fei Yang;Yuan-Ke Zhou;Lin Zhang;Yang Gao;Pu-Feng Du
7 VisFeature: a stand-alone program for visualizing and analyzing statistical features of biological sequences 期刊论文 Jun Wang;Pufeng Du;Xin-Yu Xue;Guang-Ping Li;Yuan-Ke Zhou;Wei Zhao;Hao Lin;Wei Chen
8 KNIndex: a comprehensive database of physicochemical properties for k-tuple nucleotides 期刊论文 Wen-Ya Zhang;Junhai Xu;Jun Wang;Yuan-Ke Zhou;Wei Chen;Pufeng Du
9 XGEM: Predicting Essential miRNAs by the Ensembles of Various Sequence-Based Classifiers With XGBoost Algorithm 期刊论文 Hui Min;Xiao-Hong Xin;Chu-Qiao Gao;Likun Wang;Pu-Feng Du
10 Predicting Endoplasmic Reticulum Resident Proteins Using Auto-Cross Covariance Transformation With a U-Shaped Residue Weight-Transfer Function 期刊论文 Yang-Yang Miao;Wei Zhao;Guang-Ping Li;Yang Gao;Pufeng Du
11 NPI-GNN: Predicting ncRNA-protein interactions with deep graph neural networks 期刊论文 Zi-Ang Shen;Tao Luo;Yuan-Ke Zhou;Han Yu;Pu-Feng Du
12 Predicting protein sub-Golgi locations by combining functional domain enrichment scores with pseudo-amino acid compositions 期刊论文 Wei Zhao;Guang-Ping Li;Jun Wang;Yuan-Ke Zhou;Yang Gao;Pufeng Du
13 SGII: Systematic Identification of Essential lncRNAs in Mouse and Human Genome With lncRNA-Protein-Protein Heterogeneous Interaction Network 期刊论文 Xiao-Hong Xin;Ying-Ying Zhang;Chu-Qiao Gao;Hui Min;Likun Wang;Pu-Feng Du
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