基于单细胞RNA深度测序解析自噬在胚胎造血干细胞发生中的功能及机制
81770104
2017
H0801.造血、造血调控与造血微环境
王栋
面上项目
教授
南方医科大学
55万元
生物信息学;单细胞测序;造血干细胞发生;胚胎;自噬
2018-01-01到2021-12-31
- 中英文摘要
- 结题摘要
- 结题报告
- 项目成果
- 项目参与人
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| 序号 | 标题 | 类型 | 作者 |
|---|---|---|---|
| 1 | Design powerful predictor for mRNA subcellular location prediction in Homo sapiens | 期刊论文 | Zhang Zhao-Yue;Yang Yu-He;Ding Hui;Wang Dong;Chen Wei;Lin Hao |
| 2 | RNAInter in 2020: RNA interactome repository with increased coverage and annotation | 期刊论文 | Lin Yunqing;Liu Tianyuan;Cui Tianyu;Wang Zhao;Zhang Yuncong;Tan Puwen;Huang Yan;Yu Jia;Wang Dong |
| 3 | Transcriptomic insights into temporal expression pattern of autophagy genes during monocytic and granulocytic differentiation | 期刊论文 | Yan Huang;Puwen Tan;Xiaoshuang Wang;Ying Yi;Yongfei Hu;Dong Wang;Fang Wang |
| 4 | RIscoper: a tool for RNA-RNA interaction extraction from the literature | 期刊论文 | Zhang Yang;Liu Tianyuan;Chen Liqun;Yang Jinxurong;Yin Jiayi;Zhang Yuncong;Yun Zhixi;Xu Hao;Ning Lin;Guo Fengbiao;Jiang Yongshuai;Lin Hao;Wang Dong;Huang Yan;Huang Jian |
| 5 | Hematopoietic Stem Cell Heterogeneity Is Linked to the Initiation and Therapeutic Response of Myeloproliferative Neoplasms | 期刊论文 | Tong Jingyuan;Sun Ting;Ma Shihui;Zhao Yanhong;Ju Mankai;Gao Yuchen;Zhu Ping;Tan Puwen;Fu Rongfeng;Zhang Anqi;Wang Ding;Wang Di;Xiao Zhijian;Zhou Jiaxi;Yang Renchi;Loughran Stephen J;Li Juan;Green Anthony R;Bresnick Emery H;Wang Dong;Cheng Tao;Zhang Lei;Shi Lihong |
| 6 | Cellinker: a platform of ligand-receptor interactions for intercellular communication analysis. | 期刊论文 | Zhang Yang;Liu Tianyuan;Wang Jing;Zou Bohao;Li Le;Yao Linhui;Chen Kechen;Ning Lin;Wu Bingyi;Zhao Xiaoyang;Wang Dong |
| 7 | CellCall: integrating paired ligand–receptor and transcription factor activities for cell–cell communication | 期刊论文 | Yang Zhang;Tianyuan Liu;Xuesong Hu;Mei Wang;Jing Wang;Bohao Zou;Puwen Tan;Tianyu Cui;Yiying Dou;Lin Ning;Yan huang;Shuan Rao;Dong Wang;Xiaoyang Zhao |
| 8 | MNDR v2.0: an updated resource of ncRNA-disease associations in mammals | 期刊论文 | Cui Tianyu;Zhang Lin;Huang Yan;Yi Ying;Tan Puwen;Zhao Yue;Hu Yongfei;Xu Liyan;Li Enmin;Wang Dong |
| 9 | hnRNPLL controls pluripotency exit of embryonic stem cells by modulating alternative splicing of Tbx3 and Bptf. | 期刊论文 | Wang Xue;Ping Changyun;Tan Puwen;Sun Chenguang;Liu Guang;Liu Tao;Yang Shuchun;Si Yanmin;Zhao Lijun;Hu Yongfei;Jia Yuyan;Wang Xiaoshuang;Zhang Meili;Wang Fang;Wang Dong;Yu Jia;Ma Yanni;Huang Yue |
| 10 | cncRNAdb: a manually curated resource of experimentally supported RNAs with both protein-coding and noncoding function. | 期刊论文 | Huang Yan;Wang Jing;Zhao Yue;Wang Huafeng;Liu Tianyuan;Li Yuhe;Cui Tianyu;Li Weiyi;Feng Yige;Luo Jiaxin;Gong Jiaqi;Ning Lin;Zhang Yong;Wang Dong;Zhang Yang |
| 11 | KSRP specifies monocytic and granulocytic differentiation through regulating miR-129 biogenesis and RUNX1 expression | 期刊论文 | Zhao Hongmei;Wang Xiaoshuang;Yi Ping;Si Yanmin;Tan Puwen;He Jinrong;Yu Shan;Ren Yue;Ma Yanni;Zhang Junwu;Wang Dong;Wang Fang;Yu Jia |
| 12 | Deciphering the autophagy regulatory network via single-cell transcriptome analysis reveals a requirement for autophagy homeostasis in spermatogenesis | 期刊论文 | Mei Wang;Yanwen Xu;Yuncong Zhang;Yuhan Chen;Gang Chang;Geng An;Xinyan Yang;Caihong Zheng;Jiexiang Zhao;Zhaoting Liu;Dazhuang Wang;Kai Miao;Shuan Rao;Meng Dai;Dong Wang;Xiao-Yang Zhao |
| 13 | MNDR v3.0: mammal ncRNA-disease repository with increased coverage and annotation | 期刊论文 | Ning Lin;Cui Tianyu;Zheng Boyang;Wang Nuo;Luo Jiaxin;Yang Beilei;Du Mengze;Cheng Jun;Dou Yiying;Wang Dong |
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