微RNA介导的长链非编码RNA的调控网络和功能研究

31370791
2013
C0509.生物学过程与代谢
杨建华
面上项目
教授
中山大学
80万元
长链非编码RNA;功能基因组学;调控网络;微RNA;竞争性内源RNA
2014-01-01到2017-12-31
  • 中英文摘要
  • 结题摘要
  • 结题报告
  • 项目成果
  • 项目参与人
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序号 标题 类型 作者
1 deepBase v2.0: identification, expression, evolution and function of small RNAs, LncRNAs and circular RNAs from deep-sequencing data 期刊论文 Zheng Ling-Ling;Li Jun-Hao;Wu Jie;Sun Wen-Ju;Liu Shun;Wang Ze-Lin;Zhou Hui;Yang Jian-Hua;Qu Liang-Hu
2 Spatial-temporal transcriptional dynamics of long non-coding RNAs in human brain 期刊论文 Zhang Xiao-Qin;Wang Ze-Lin;Poon Ming-Wai;Yang Jian-Hua
3 ChIPBase v2.0: decoding transcriptional regulatory networks of non-coding RNAs and protein-coding genes from ChIP-seq data 期刊论文 Zhou Ke-Ren;Liu Shun;Sun Wen-Ju;Zheng Ling-Ling;Zhou Hui;Yang Jian-Hua;Qu Liang-Hu
4 StarScan: a web server for scanning small RNA targets from degradome sequencing data 期刊论文 Liu Shun;Li Jun-Hao;Wu Jie;Zhou Ke-Ren;Zhou Hui;Yang Jian-Hua;Qu Liang-Hu
5 Comprehensive Genomic Characterization of RNA-binding Proteins across Human Cancers 期刊论文 Ze-Lin Wang;Bin Li;Yu-Xia Luo;Qiao Lin;Shu-Rong Liu;Xiao-Qin Zhang;Hui Zhou;Jian-Hua Yang;Liang-Hu Qu
6 dreamBase: DNA modification, RNA regulation and protein binding of expressed pseudogenes in human health and disease 期刊论文 Zheng LL;Zhou KR;Liu S;Zhang DY;Wang ZL;Chen ZR;Yang JH;Qu LH
7 Integrative analysis reveals clinical phenotypes and oncogenic potentials of long non-coding RNAs across 15 cancer types 期刊论文 Wang Ze-Lin;Li Bin;Piccolo Stephen R.;Zhang Xiao-Qin;Li Jun-Hao;Zhou Hui;Yang Jian-Hua;Qu Liang-Hu
8 tRF2Cancer: A web server to detect tRNA-derived small RNA fragments (tRFs) and their expression in multiple cancers 期刊论文 Zheng Ling-Ling;Xu Wei-Lin;Liu Shun;Sun Wen-Ju;Li Jun-Hao;Wu Jie;Yang Jian-Hua;Qu Liang-Hu
9 RMBase: a resource for decoding the landscape of RNA modifications from high-throughput sequencing data 期刊论文 Sun Wen-Ju;Li Jun-Hao;Liu Shun;Wu Jie;Zhou Hui;Qu Liang-Hu;Yang Jian-Hua
10 starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data 期刊论文 Li Jun-Hao;Liu Shun;Zhou Hui;Qu Liang-Hu;Yang Jian-Hua
11 RMBase v2.0: deciphering the map of RNA modifications from epitranscriptome sequencing data. 期刊论文 Xuan JJ;Sun WJ;Lin PH;Zhou KR;Liu S;Zheng LL;Qu LH;Yang JH
12 Discovery of protein-lncRNA interactions by integrating large-scale CLIP-Seq and RNA-Seq datasets. 期刊论文 Li Jun-Hao;Liu Shun;Zheng Ling-Ling;Wu Jie;Sun Wen-Ju;Wang Ze-Lin;Zhou Hui;Qu Liang-Hu;Yang Jian-Hua
13 StarScan: a web server for scanning small RNA targets from degradome sequencing data 期刊论文 Liu Shun;Li Jun-Hao;Wu Jie;Zhou Ke-Ren;Zhou Hui;Yang Jian-Hua;Qu Liang-Hu
14 deepBase v2.0: identification, expression, evolution and function of small RNAs, LncRNAs and circular RNAs from deep-sequencing data 期刊论文 Zheng Ling-Ling;Li Jun-Hao;Wu Jie;Sun Wen-Ju;Liu Shun;Wang Ze-Lin;Zhou Hui;Yang Jian-Hua;Qu Liang-Hu
15 RMBase: a resource for decoding the landscape of RNA modifications from high-throughput sequencing data 期刊论文 Sun Wen-Ju;Li Jun-Hao;Liu Shun;Wu Jie;Zhou Hui;Qu Liang-Hu;Yang Jian-Hua
16 ChIPBase v2.0: decoding transcriptional regulatory networks of non-coding RNAs and protein-coding genes from ChIP-seq data 期刊论文 Zhou Ke-Ren;Liu Shun;Sun Wen-Ju;Zheng Ling-Ling;Zhou Hui;Yang Jian-Hua;Qu Liang-Hu
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