基于低秩和图正则约束的矩阵分解方法研究及在癌症多组学数据中的应用

61872220
2018
F0213.生物信息计算与数字健康
刘金星
面上项目
教授
曲阜师范大学
64万元
生物信息学;流型学习;癌症多组学数据;低秩回归;矩阵分解方法
2019-01-01到2022-12-31
  • 中英文摘要
  • 结题摘要
  • 结题报告
  • 项目成果
  • 项目参与人
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序号 标题 类型 作者
1 A multi-view classification and feature selection method via sparse low-rank regression analysis 期刊论文 Lu Yao;Gao Ying-Lian;Li Pei-Yong;Liu Jin-Xing
2 Supervised Discriminative Sparse PCA for Corn-Characteristic Gene Selection and Tumor Classification on Multiview Biological Data 期刊论文 Chun-Mei Feng;Yong Xu;Jin-Xing Liu;Ying-Lian Gao;Chun-Hou Zheng
3 A binary biclustering algorithm based on the adjacency difference matrix for gene expression data analysis 期刊论文 Chu He-Ming;Liu Jin-Xing;Zhang Ke;Zheng Chun-Hou;Wang Juan;Kong Xiang-Zhen
4 2020山东省优秀硕士学位论文 奖励 侯米潇;刘金星(指导教师)
5 2020山东省研究生优秀科研创新成果奖(二等奖) 奖励 王传远;任良瑞;高明明;刘金星(指导教师)
6 Extreme Learning Machine Based on Double Kernel Risk-Sensitive Loss for Cancer Samples Classification 会议论文 Niu Zhen-Xin;Ren Liang-Rui;Zhu Rong;Kong Xiang-Zhen;Gao Ying-Lian;Liu Jin-Xing
7 Adaptive total-variation joint learning model for analyzing single cell RNA seq data 会议论文 Dai-Jun Zhang;Jing-Xiu Zhao;Jin-Xing Liu;Ying-Lian Gao
8 Sparse Regularization Tensor Robust PCA Based on t-product and Its Application in Cancer Genomic Data 会议论文 Yang Hang-Jin;Zhao Yu-Ying;Liu Jin-Xing;Lei Yu-Xia;Shang Jun-Liang;Kong Xiang-Zhen
9 An integrated Extreme learning machine based on kernel risk-sensitive loss of q-Gaussian and voting mechanism for sample classification 会议论文 Zhi-Yuan Li;Ying-Lian Gao;Zhen-Xin Niu;Sha-Sha Yuan;Chun-Hou Zheng;Jin-Xing Liu
10 Adaptive Total Variation Constraint Hypergraph Regularized NMF and Its Application on Single-Cell RNA-Seq Data 会议论文 Zhu Ya-Li;Wu Ming-Juan;Wang Chuan-Yuan;Hu Yue;Liu Jin-Xing
11 L-2,L-1-GRMF: an improved graph regularized matrix factorization method to predict drug-target interactions 期刊论文 Zhen Cui;Ying-Lian Gao;Jin-Xing Liu;Ling-Yun Dai;Sha-Sha Yuan
12 Robust hypergraph regularized non-negative matrix factorization for sample clustering and feature selection in multi-view gene expression data 期刊论文 Na Yu;Ying-Lian Gao;Jin-Xing Liu;Juan Wang;Junliang Shang
13 基于整合非负矩阵分解的样本聚类和特征识别方法 专利 代凌云;刘金星;郑春厚
14 SLRRSC: Single-Cell Type Recognition Method Based on Similarity and Graph Regularization Constraints 期刊论文 Na-Na Zhang;Jin-Xing Liu;Chun-Hou Zheng;Juan Wang
15 Hypergraph Regularized Discriminative Nonnegative Matrix Factorization on Sample Classification and Co-Differentially Expressed Gene Selection 期刊论文 Yong-Jing Hao;Ying-Lian Gao;Mi-Xiao Hou;Ling-Yun Dai;Jin-Xing Liu
16 WGRCMF: A Weighted Graph Regularized Collaborative Matrix Factorization Method for Predicting Novel LncRNA-Disease Associations 期刊论文 Jin-Xing Liu;Zhen Cui;Ying-Lian Gao;Xiang-Zhen Kong
17 LncRNA-Disease Associations Prediction Using Bipartite Local Model With Nearest Profile-Based Association Inferring 期刊论文 Cui Zhen;Liu Jin-Xing;Gao Ying-Lian;Zhu Rong;Yuan Sha-Sha
18 Kernel risk-sensitive mean p-power loss based hyper-graph regularized robust extreme learning machine and its semi-supervised extension for sample classification 期刊论文 Zhen-Xin Niu;Cui-Na Jiao;Liang-Rui Ren;Rong Zhu;Juan Wang;Jin-Xing Liu
19 Dual-network sparse graph regularized matrix factorization for predicting miRNA-disease associations 期刊论文 Ming-Ming Gao;Zhen Cui;Ying-Lian Gao;Jin-Xing Liu;Chun-Hou Zheng
20 Hyper-Graph Regularized Constrained NMF for Selecting Differentially Expressed Genes and Tumor Classification 期刊论文 Jiao Cui-Na;Gao Ying-Lian;Yu Na;Liu Jin-Xing;Qi Lian-Yong
21 Multi-label Fusion Collaborative Matrix Factorization for Predicting LncRNA-Disease Associations 期刊论文 Ming-Ming Gao;Zhen Cui;Ying-Lian Gao;Juan-Wang Wang;Jin-Xing Liu
22 LJELSR: A Strengthened Version of JELSR for Feature Selection and Clustering 期刊论文 Sha-Sha Wu;Mi-Xiao Hou;Chun-Mei Feng;Jin-Xing Liu
23 Similarity and Dissimilarity Regularized Nonnegative Matrix Factorization for Single-Cell RNA-seq Analysis 期刊论文 Zhu Ya-Li;Yuan Sha-Sha;Liu Jin-Xing
24 Principal Component Analysis Based on Graph Laplacian and Double Sparse Constraints for Feature Selection and Sample Clustering on Multi-View Data 期刊论文 Ming-Juan Wu;Ying-Lian Gao;Jin-Xing Liu;Rong Zhu;Juan Wang
25 An integrated robust graph regularized non-negative matrix factorization for multi-dimensional genomic data analysis 会议论文 Hao Yong-Jing;Hou Mi-Xiao;Zhu Rong;Liu Jin-Xing
26 Bipartite graph-based collaborative matrix factorization method for predicting miRNA-disease associations 期刊论文 Zhou Feng;Yin Meng-Meng;Jiao Cui-Na;Cui Zhen;Zhao Jing-Xiu;Liu Jin-Xing
27 A Low-Rank Representation Method Regularized by Dual-Hypergraph Laplacian for Selecting Differentially Expressed Genes 期刊论文 Xiu-Xiu Xu;Ling-Yun Dai;Xiang-Zhen Kong;Jin-Xing Liu
28 Dsnpcmf: Predicting mirna-disease associations with collaborative matrix factorization based on double sparse and nearest profile 会议论文 Yin Meng-Meng;Cui Zhen;Liu Jin-Xing;Gao Ying-Lian;Kong Xiang-Zhen
29 Differentially Expressed Genes Extracted by the Tensor Robust Principal Component Analysis (TRPCA) Method 期刊论文 Yue Hu;Jin-Xing Liu;Ying-Lian Gao;Sheng-Jun Li;Juan Wang
30 Adaptive Total-Variation Regularized Low-Rank Representation for Analyzing Single-Cell RNA-seq Data 期刊论文 Liu Jin-Xing;Wang Chuan-Yuan;Gao Ying-Lian;Zhang Yulin;Wang Juan;Li Sheng-Jun
31 Diagnosing Alzheimer’s Disease with Bi-multitask Regularized Sparse Canonical Correlation Analysis and Logistic Regression 会议论文 Tian-Ru Wu;Cui-Na Jiao;Xin-Chun Cui;Jin-Xing Liu
32 Sparse robust graph-regularized non-negative matrix factorization based on correntropy 期刊论文 Wang Chuan-Yuan;Gao Ying-Lian;Liu Jin-Xing;Dai Ling-Yun;Shang Junliang
33 The computational prediction of drug-disease interactions using the dual-network L2,1-CMF method 期刊论文 Zhen Cui;Ying-Lian Gao;Jin-Xing Liu;Juan Wang;Junliang Shang;Ling-Yun Dai
34 L2,1-Extreme Learning Machine: An Efficient Robust Classifier for Tumor Classification 期刊论文 Ren Liang-Rui;Gao Ying-Lian;Liu Jin-Xing;Zhu Rong;Kong Xiang-Zhen
35 2021山东省研究生优秀成果奖(三等奖) 奖励 尹萌萌;王静;焦翠娜;尚军亮(指导教师);刘金星(指导教师)
36 Single-Cell RNA Sequencing Data Clustering by Low-Rank Subspace Ensemble Framework 期刊论文 Chuan-Yuan Wang;Ying-Lian Gao;Jin-Xing Liu;Xiang-Zhen Kong;Chun-Hou Zheng
37 A new method for mining information of co-expression network based on multi-cancers integrated data 期刊论文 Hou Mi-Xiao;Gao Ying-Lian;Liu Jin-Xing;Shang Junliang;Zhu Rong;Yuan Sha-Sha
38 Kernel risk-sensitive mean p-power error based robust extreme learning machine for classification 期刊论文 Ren Liang-Rui;Gao Ying-Lian;Shang Junliang;Liu Jin-Xing
39 Robust Graph Regularized Extreme Learning Machine Auto Encoder and Its Application to Single-Cell Samples Classification 会议论文 Ren Liang-Rui;Liu Jin-Xing;Gao Ying-Lian;Kong Xiang-Zhen;Zheng Chun-Hou
40 Hyper-graph robust non-negative matrix factorization method for cancer sample clustering and feature selection 会议论文 Jiao Cui-Na;Wu Tian-Ru;Liu Jin-Xing;Kong Xiang-Zhen
41 MCCMF: collaborative matrix factorization based on matrix completion for predicting miRNA-disease associations 期刊论文 Wu Tian-Ru;Yin Meng-Meng;Jiao Cui-Na;Gao Ying-Lian;Kong Xiang-Zhen;Liu Jin-Xing
42 A New Graph Autoencoder-Based Consensus-Guided Model for scRNA-seq Cell Type Detection 期刊论文 Dai-Jun Zhang;Ying-Lian Gao;Jing-Xiu Zhao;Chun-Hou Zheng;Jin-Xing Liu
43 Correntropy induced loss based sparse robust graph regularized extreme learning machine for cancer classification 期刊论文 Ren Liang-Rui;Gao Ying-Lian;Liu Jin-Xing;Shang Junliang;Zheng Chun-Hou
44 Correntropy-Based Hypergraph Regularized NMF for Clustering and Feature Selection on Multi-Cancer Integrated Data 期刊论文 Na Yu;Ming-Juan Wu;Jin-Xing Liu;Chun-Hou Zheng;Yong Xu
45 Dual Sparse Collaborative Matrix Factorization Method Based on Gaussian Kernel Function for Predicting LncRNA-Disease Associations 会议论文 Ming-Ming Gao;Zhen Cui;Ying-Lian Gao;Feng Li;Jin-Xing Liu
46 Tensor Robust Principal Component Analysis with Low-Rank Weight Constraints for Sample Clustering 会议论文 Zhao Yu-Ying;Wang Mao-Li;Wang Juan;Yuan Sha-Sha;Liu Jin-Xing;Kong Xiang-Zhen
47 Network analysis based on low-rank method for mining information on integrated data of multi-cancers 期刊论文 Mi-Xiao Hou;Ying-Lian Gao;Jin-Xing Liu;Ling-Yun Dai;Xiang-Zhen Kong;Junliang Shang
48 LWPCMF: Logistic Weighted Profile-based Collaborative Matrix Factorization for Predicting MiRNA-Disease Associations 期刊论文 Meng-Meng Yin;Zhen Cui;Ming-Ming Gao;Jin-Xing Liu;Ying-Lian Gao
49 2019年山东省研究生优秀科研创新成果奖(三等奖) 奖励 郝永静;吴明娟;徐秀秀;刘金星(指导教师)
50 Logistic Weighted Profile-Based Bi-Random Walk for Exploring MiRNA-Disease Associations 期刊论文 Dai Ling-Yun;Liu Jin-Xing;Zhu Rong;Wang Juan;Yuan Sha-Sha
51 Integrative Hypergraph Regularization Principal Component Analysis for Sample Clustering and Co-Expression Genes Network Analysis on Multi-Omics Data 期刊论文 Wu Ming-Juan;Gao Ying-Lian;Liu Jin-Xing;Zheng Chun-Hou;Wang Juan
52 NPCMF: Nearest Profile-based Collaborative Matrix Factorization method for predicting miRNA-disease associations 期刊论文 Ying-Lian Gao;Zhen Cui;Jin-Xing Liu;Juan Wang;Chun-Hou Zheng
53 Unsupervised Cluster Analysis and Gene Marker Extraction of scRNA-seq Data Based On Non-Negative Matrix Factorization 期刊论文 Chuan-Yuan Wang;Ying-Lian Gao;Xiang-Zhen Kong;Jin-Xing Liu;Chun-Hou Zheng
54 Application of a Deep Matrix Factorization Model on Integrated Gene Expression Data 期刊论文 Hao Yong-Jing;Hou Mi-Xiao;Gao Ying-Lian;Liu Jin-Xing;Kong Xiang-Zhen
55 Tensor decomposition based on the potential low-rank and p-shrinkage generalized threshold algorithm for analyzing cancer multiomics data 期刊论文 Hang-Jin Yang;Yu-Xia Lei;Juan Wang;Xiang-Zhen Kong;Jin-Xing Liu;Ying-Lian Gao
56 DSTPCA: Double-Sparse Constrained Tensor Principal Component Analysis Method for Feature Selection 期刊论文 Hu Yue;Liu Jin-Xing;Gao Ying-Lian;Shang Junliang
57 用于样本聚类和网络分析的整合鲁棒结构化NMF模型 期刊论文 张晓宁;孔祥真;罗传文;刘金星
58 IPCARF: improving lncRNA-disease association prediction using incremental principal component analysis feature selection and a random forest classifier 期刊论文 Zhu Rong;Wang Yong;Liu Jin-Xing;Dai Ling-Yun
59 山东省优秀研究生指导教师 奖励 刘金星
60 Dual Hyper-graph Regularized Supervised NMF for Selecting Differentially Expressed Genes and Tumor Classification 期刊论文 Chuan-Yuan Wang;Na Yu;Ming-Juan Wu;Ying-Lian Gao;Jin-Xing Liu;Juan Wang
61 HTRPCA: Hypergraph Regularized Tensor Robust Principal Component Analysis for Sample Clustering in Tumor Omics Data 期刊论文 Zhao Yu-Ying;Jiao Cui-Na;Wang Mao-Li;Liu Jin-Xing;Wang Juan;Zheng Chun-Hou
62 Kernel Risk-Sensitive Loss based Hyper-graph Regularized Robust Extreme Learning Machine and Its Semi-supervised Extension for Classification 期刊论文 Ren Liang-Rui;Liu Jin-Xing;Gao Ying-Lian;Kong Xiang-Zhen;Zheng Chun-Hou
63 Visualization and Analysis of Single Cell RNA-Seq Data by Maximizing Correntropy Based Non-Negative Low Rank Representation 期刊论文 Cui-Na Jiao;Jin-Xing Liu;Juan Wang;Junliang Shang;Chun-Hou Zheng
64 DSCMF: prediction of LncRNA-disease associations based on dual sparse collaborative matrix factorization 期刊论文 Liu Jin-Xing;Gao Ming-Ming;Cui Zhen;Gao Ying-Lian;Li Feng
65 NCPLP: A novel approach for predicting microbe-associated diseases with Network Consistency Projection and Label Propagation 期刊论文 Yin Meng-Meng;Liu Jin-Xing;Gao Ying-Lian;Kong Xiang-Zhen;Zheng Chun-Hou
66 2019年山东省研究生优秀科研创新成果奖(一等奖) 奖励 崔震;胡月;于娜;刘金星(指导教师)
67 Robust Tensor Method Based on Correntropy and Tensor Singular Value Decomposition for Cancer Genomics Data 会议论文 Qian Qiao;Ying-Lian Gao;Sha-Sha Yuan;Jin-Xing Liu
68 Sparse Hyper-graph Non-negative Matrix Factorization by Maximizing Correntropy 会议论文 Cui-Na Jiao;Jin-Xing Liu;Ying-Lian Gao;Xiang-Zhen Kong;Chun-Hou Zheng;Xianzi Yu
69 Multi-View Random-Walk Graph Regularization Low-Rank Representation for Cancer Clustering and Differentially Expressed Gene Selection 期刊论文 Juan Wang;Li-Hong Wang;Jin-Xing Liu;Xiang-Zhen Kong;Sheng-Jun Li
70 RCMF: a robust collaborative matrix factorization method to predict miRNA-disease associations. 期刊论文 Zhen Cui;Jin-Xing Liu;Ying-Lian Gao;Chun-Hou Zheng;Juan Wang
71 Robust Principal Component Analysis Based on Hypergraph Regularization for Sample Clustering and Co-Characteristic Gene Selection 期刊论文 Ying-Lian Gao;Ming-Juan Wu;Jin-Xing Liu;Chun-Hou Zheng;Juan Wang
72 MKL-LP: Predicting Disease-Associated Microbes with Multiple-Similarity Kernel Learning-Based Label Propagation 会议论文 Ying-Lian Gao;Meng-Meng Yin;Jin-Xing Liu;Junliang Shang;Chun-Hou Zheng
73 淮海科学技术奖 奖励 刘金星;郑春厚;尚军亮;齐连永;代凌云
74 2021山东省优秀硕士学位论文 奖励 于娜;刘金星(指导教师)
75 Locally Manifold Non-negative Matrix Factorization Based on Centroid for scRNA-seq Data Analysis 会议论文 Wang Chuan-Yuan;Gao Ying-Lian;Jiao Cui-Na;Liu Jin-Xing;Zheng Chun-Hou;Kong Xiang-Zhen
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