基于新一代测序数据的顺式调控模体预测与分析

61772313
2017
F0213.生物信息计算与数字健康
刘丙强
面上项目
教授
山东大学
63万元
计算生物学;顺式调控模体;新一代测序数据;转录调控网络;组合优化算法
2018-01-01到2021-12-31
  • 中英文摘要
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  • 结题报告
  • 项目成果
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序号 标题 类型 作者
1 Prediction of regulatory motifs from human Chip-sequencing data using a deep learning framework 期刊论文 Yang Jinyu;Ma Anjun;Hoppe Adam D.;Wang Cankun;Li Yang;Zhang Chi;Wang Yan;Liu Bingqiang;Ma Qin
2 Interpretation of differential gene expression results of RNA-seq data: review and integration 期刊论文 McDermaid Adam;Monier Brandon;Zhao Jing;Liu Bingqiang;Ma Qin
3 Network analyses in microbiome based on high-throughput multi-omics data 期刊论文 Zhaoqian Liu;Anjun Ma;Ewy Mathé;Marlena Merling;Qin Ma;Bingqiang Liu
4 Computational Prediction of Sigma-54 Promoters in Bacterial Genomes by Integrating Motif Finding and Machine Learning Strategies 期刊论文 Liu Bingqiang;Han Ling;Liu Xiangrong;Wu Jichang;Ma Qin
5 Protein-protein interaction sites prediction by ensemble random forests with synthetic minority oversampling technique 期刊论文 Wang Xiaoying;Yu Bin;Ma Anjun;Chen Cheng;Liu Bingqiang;Ma Qin
6 The functional determinants in the organization of bacterial genomes 期刊论文 Zhaoqian Liu;Jingtong Feng;Bin Yu;Qin Ma;Bingqiang Liu
7 A novel computational framework for genome-scale alternative transcription units prediction 期刊论文 Wang Qi;Liu Zhaoqian;Chou Wen-Chi;Ettwiller Laurence;Ma Qin;Liu Bingqiang
8 Identification of lncRNAs-gene interactions in transcription regulation based on co-expression analysis of RNA-seq data 期刊论文 Lu Sijie;Xie Juan;Li Yang;Yu Bin;Ma Qin;Liu Bingqiang
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