基因组复杂变异的检测算法和应用
31671372
2016
C0608.生物数据资源与分析方法
叶凯
面上项目
教授
西安交通大学
65万元
基因组大数据;特征选择;软件开发;机器学习;人
2017-01-01到2020-12-31
- 中英文摘要
- 结题摘要
- 结题报告
- 项目成果
- 项目参与人
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| 序号 | 标题 | 类型 | 作者 |
|---|---|---|---|
| 1 | gCAnno: a graph-based single cell type annotation method | 期刊论文 | Yang Xiaofei;Gao Shenghan;Wang Tingjie;Yang Boyu;Dang Ningxin;Ye Kai |
| 2 | Mapping Genome Variants Sheds Light on Genetic and Phenotypic Differentiation in Chinese | 期刊论文 | Guo Li;Ye Kai |
| 3 | The opium poppy genome and morphinan production. | 期刊论文 | Guo Li;Winzer Thilo;Yang Xiaofei;Li Yi;Ning Zemin;He Zhesi;Teodor Roxana;Lu Ying;Bowser Tim A;Graham Ian A;Ye Kai |
| 4 | MSIsensor-pro: Fast, Accurate, and Matched-normal-sample-free Detection of Microsatellite Instability | 期刊论文 | Peng Jia;Xiaofei Yang;Li Guo;Bowen Liu;Jiadong Lin;Hao Liang;Jianyong Sun;Chengsheng Zhang;Kai Ye |
| 5 | Predicting the early risk of ophthalmopathy in Graves' disease patients using TCR repertoire | 期刊论文 | Wang Yue;Liu Yufeng;Yang Xiaofei;Guo Hui;Lin Jiadong;Yang Jinkui;He Mingqian;Wang Jingya;Liu Xiaomei;Shi Tingting;Wu Liping;Zhang Chengsheng;Ye Kai;Shi Bingyin |
| 6 | MEpurity: estimating tumor purity using DNA methylation data | 期刊论文 | Liu Bowen;Yang Xiaofei;Wang Tingjie;Lin Jiadong;Kang Yongyong;Jia Peng;Ye Kai |
| 7 | 一种基于模式增长算法的基因变异检测方法 | 专利 | 叶凯;杨帆;杨晓飞;蔺佳栋;梁皓;郭立 |
| 8 | One reference genome is not enough | 期刊论文 | Yang Xiaofei;Lee Wan Ping;Ye Kai;Lee Charles |
| 9 | PVTree: A Sequential Pattern Mining Method for Alignment Independent Phylogeny Reconstruction | 期刊论文 | Kang Yongyong;Yang Xiaofei;Lin Jiadong;Ye Kai |
| 10 | 一种基于序列模式挖掘算法的系统发生树构建方法 | 专利 | 叶凯;康永永;杨晓飞;贾鹏;蔺佳栋;郭立 |
| 11 | Dynamic network inference and association computation discover gene modules regulating virulence, mycotoxin and sexual reproduction in Fusarium graminearum | 期刊论文 | Li Guo;Mengjie Ji;Kai Ye |
| 12 | 面向生物大数据的流式传输与变异实时挖掘系统及方法 | 专利 | 杨晓飞;孙雨;叶凯;蔺佳栋;段明哲;郭立 |
| 13 | 一种基于基因组测序的微卫星不稳定性检测系统及方法与流程 | 专利 | 叶凯;贾鹏;杨晓飞;刘博文;康永永;梁皓 |
| 14 | Multi-platform discovery of haplotype-resolved structural variation in human genomes | 期刊论文 | Chaisson Mark J P;Sanders Ashley D;Zhao Xuefang;Malhotra Ankit;Porubsky David;Rausch Tobias;Gardner Eugene J;Rodriguez Oscar L;Guo Li;Collins Ryan L;Fan Xian;Wen Jia;Handsaker Robert E;Fairley Susan;Kronenberg Zev N;Kong Xiangmeng;Hormozdiari Fereydoun;Lee Dillon;Wenger Aaron M;Hastie Alex R;Antaki Danny;Anantharaman Thomas;Audano Peter A;Brand Harrison;Cantsilieris Stuart;Cao Han;Cerveira Eliza... |
| 15 | T细胞数据处理方法及装置 | 专利 | 施秉银;王悦;刘宇峰;叶凯;杨晓飞;蔺佳栋 |
| 16 | 一种基于二代测序数据的反转相关复杂变异检测方法 | 专利 | 杨晓飞;卜楠;叶凯;蔺佳栋;梁皓;郭立 |
| 17 | Computational pan-genomics: status, promises and challenges | 期刊论文 | Marschall Tobias;Marz Manja;Abeel Thomas;Dijkstra Louis;Dutilh Bas E;Ghaffaari Ali;Kersey Paul;Kloosterman Wigard P;Makinen Veli;Novak Adam M;Paten Benedict;Porubsky David;Rivals Eric;Alkan Can;Baaijens Jasmijn A;De Bakker Paul I W;Boeva Valentina;Bonnal Raoul J P;Chiaromonte Francesca;Chikhi Rayan;Ciccarelli Francesca D;Cijvat Robin;Datema Erwin;Van Duijn Cornelia M;Eichler Evan E;Ernst Corinna;Eskin Eleazar;Garrison Erik... |
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