基于质谱技术高通量的完整信息糖蛋白/糖肽的鉴定新方法研究
31671369
2016
C0608.生物数据资源与分析方法
孙世伟
面上项目
副研究员
中国科学院计算技术研究所
60万元
糖组学;质谱学;多级质谱;糖蛋白;算法
2017-01-01到2020-12-31
- 中英文摘要
- 结题摘要
- 结题报告
- 项目成果
- 项目参与人
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| 序号 | 标题 | 类型 | 作者 |
|---|---|---|---|
| 1 | Linkage and sequence analysis of neutral oligosaccharides by negative-ion MALDI tandem mass spectrometry with laser-induced dissociation | 期刊论文 | Huang Chuncui;Yan Jingyu;Zhan Lingpeng;Zhao Min;Zhou Jinyu;Gao Huanyu;Xie Wenchun;Li Yan;Chai Wengang |
| 2 | Toward Automated Identification of Glycan Branching Patterns Using Multistage Mass Spectrometry with Intelligent Precursor Selection | 期刊论文 | Sun Shiwei;Huang Chuncui;Wang Yaojun;Liu Yaming;Zhang Jingwei;Zhou Jinyu;Gao Feng;Yang Fei;Chen Runsheng;Mulloy Barbara;Chai Wengang;Li Yan;Bu Dongbo |
| 3 | Predicting human contacts through alternating direction method of multipliers | 期刊论文 | Huang Chunlin;Bu Dongbo |
| 4 | Best-first search guided multistage mass spectrometry-based glycan identification | 期刊论文 | Wang Yaojun;Bu Dongbo;Huang Chuncui;Wang Hui;Zhou Jinyu;Dong Junchuan;Pan Weiyi;Zhang Jingwei;Zhang Qi;Li Yan;Sun Shiwei |
| 5 | Multistage mass spectrometry with intelligent precursor selection for N-glycan branching pattern analysis | 期刊论文 | Huang Chuncui;Wang Hui;Bu Dongbo;Zhou Jinyu;Dong Junchuan;Zhang Jingwei;Gao Huanyu;Wang Yaojun;Chai Wengang;Sun Shiwei;Li Yan |
| 6 | DIFFUSE: predicting isoform functions from sequences and expression profiles via deep learning | 期刊论文 | Chen Hao;Shaw Dipan;Zeng Jianyang;Bu Dongbo;Jiang Tao |
| 7 | Constructing effective energy functions for protein structure prediction through broadening attraction-basin and reverse Monte Carlo sampling | 期刊论文 | Wang Chao;Wei Yi;Zhang Haicang;Kong Lupeng;Sun Shiwei;Zheng Wei-Mou;Bu Dongbo |
| 8 | Survey on Algorithms for Tandem Mass Spectrometry Oligosaccharide Identification | 期刊论文 | Wang Yao Jun;Huang Chun Cui;Gao Feng;Zhang Jing Wei;Li Yan;Bu Dong Bo;Sun Shi Wei |
| 9 | TagDict: Prediction of Theoretical Spectra of Peptides Based on A Tag Dictionary | 期刊论文 | Yaojun Wang;Jingwei Zhang;Dongbo Bu;Shiwei Sun |
| 10 | Improving Protein Fold Recognition by Extracting Fold-specific Features from Predicted Residue-residue Contacts | 期刊论文 | Jianwei Zhu;Haicang Zhang;Shuai Cheng Li;Chao Wang;Lupeng Kong;Shiwei Sun;Wei-Mou Zheng;Dongbo Bu |
| 11 | 一种糖结构鉴定方法及糖结构鉴定装置 | 专利 | 孙世伟;卜东波;杨飞;王耀君;李岩;黄纯翠;陈润生;高枫;刘亚名 |
| 12 | Identification of glycan branching patterns using multistage mass spectrometry with spectra tree analysis | 期刊论文 | Wang Hui;Zhang Jingwei;Dong Junchuan;Hou Meijie;Pan Weiyi;Bu Dongbo;Zhou Jinyu;Zhang Qi;Wang Yaojun;Zhao Keli;Li Yan;Huang Chuncui;Sun Shiwei |
| 13 | 一种第二代、三代基因组测序数据联用的拼接方法及系统 | 专利 | 卜东波;张仁玉;陈挺;李帅成;孙世伟;刘兴武;许情;郑全刚;王超 |
| 14 | 多级质谱生物大分子结构鉴定方法 | 专利 | 孙世伟;王耀君;卜东波;李岩;黄纯翠;刘亚名;杨飞;武红梅;陈润生 |
| 15 | 基于多级质谱技术高通量鉴定糖链分支结构 | 会议论文 | 黄纯翠;孙世伟;王耀君;刘亚名;张敬玮;周巾煜;高枫;杨飞;陈润生;柴文刚;卜东波;李岩 |
| 16 | Protein threading using residue co-variation and deep learning | 期刊论文 | Zhu Jianwei;Wang Sheng;Bu Dongbo;Xu Jinbo |
| 17 | De novo glycan structural identification from mass spectra using tree merging strategy | 期刊论文 | Ju Fusong;Zhang Jingwei;Bu Dongbo;Li Yan;Zhou Jinyu;Wang Hui;Wang Yaojun;Huang Chuncui;Sun Shiwei |
| 18 | Predicting protein inter-residue contacts using composite likelihood maximization and deep learning | 期刊论文 | Zhang Haicang;Zhang Qi;Ju Fusong;Zhu Jianwei;Gao Yujuan;Xie Ziwei;Deng Minghua;Sun Shiwei;Zheng Wei-Mou;Bu Dongbo |
| 19 | Identification of carbohydrate peripheral epitopes important for recognition by positive-ion MALDI multistage mass spectrometry | 期刊论文 | Huang Chuncui;Sun Shiwei;Yan Jingyu;Wang Hui;Zhou Jinyu;Gao Huanyu;Xie Wenchun;Li Yan;Chai Wengang |
| 20 | FcγR-binding affinity of monoclonal murine IgG1s carrying different N-linked Fc oligosaccharides | 期刊论文 | Jinyu Zhou;Huanyu Gao;Wenchun Xie;Yan Li |
| 21 | NIST Interlaboratory Study on Glycosylation Analysis of Monoclonal Antibodies: Comparison of Results from Diverse Analytical Methods. | 期刊论文 | De Leoz Maria Lorna A;Duewer David L;Fung Adam;Liu Lily;Yau Hoi Kei;Potter Oscar;Staples Gregory O;Furuki Kenichiro;Frenkel Ruth;Hu Yunli;Sosic Zoran;Zhang Peiqing;Altmann Friedrich;Gru Nwald-Grube Clemens;Shao Chun;Zaia Joseph;Evers Waltraud;Pengelley Stuart;Suckau Detlev;Wiechma... |
| 22 | 复杂网络上疾病传播溯源算法综述 | 期刊论文 | 黄春林;刘兴武;邓明华;周杨;卜东波 |
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