硫胺素依赖酶催化机理的理论研究

21173129
2011
B0301.化学理论与方法
刘永军
面上项目
教授
山东大学
56万元
量子化学;反应机理;酶反应
2012-01-01到2015-12-31
  • 中英文摘要
  • 结题摘要
  • 结题报告
  • 项目成果
  • 项目参与人
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序号 标题 类型 作者
1 The reaction mechanism of UDP-GlcNAc 5,6-dehydratase: a quantum mechanical/molecular mechanical (QM/MM) study 期刊论文 Guangcai Ma|Yongjun Liu|
2 Catalytic mechanisms of Au11 and Au11-nPtn (n=1–2) clusters: a DFT investigation on the oxidation of CO by O2 期刊论文 Xueli Cheng|Yanyun Zhao|Feng Li|Yongjun Liu|
3 Exploring the substrate-assisted acetylation mechanism by UDP-linked sugar N- acetyltransferase from QM/MM calculations: the role of residue Asn84 and the e?ects of starting geometries 期刊论文 Guangcai Ma|Na Cheng|Hao Su|Yongjun Liu|
4 A theoretical study of the catalytic mechanism of oxalyl-CoA decarboxylase, an enzyme for treating urolithiasis 期刊论文 Xiang Sheng|Yongjun Liu|Rui Zhang|
5 Quantum Mechanics and Molecular Mechanics Study of the Catalytic Mechanism of Human AMSH-LP Domain Deubiquitinating Enzymes 期刊论文 Wenyou Zhu|Yongjun Liu|Baoping Ling|
6 A QM/MM study on the catalytic mechanism of pyruvate decarboxylase 期刊论文 Qianqian Hou|Jun Gao|Yongjun Liu|Chengbu Liu|
7 Insight in to the mechanism of aminomutase reaction: A case study of phenylanine aminomutase by computational approach 期刊论文 Kang wang|Qianqian Hou|Yongjun Liu|
8 A QM/MM study of the reaction mechanism of (R)-hydroxynitrile lyases from Arabidopsis thaliana (AtHNL) 期刊论文 Wenyou Zhu|Yongjun Liu|Rui Zhang|
9 Theoretical Investigation on the Dissociation of (R)-Benzoin Catalyzed by Benzaldehyde Lyase 期刊论文 Jing Zhang|Xiang Sheng|Qianqian Hou|Yongjun Liu*|
10 Role of F- in the hydrolysis-condensation mechanisms of silicon alkoxide Si(OCH3)(4): a DFT investigation 期刊论文 Cheng, Xueli|Zhao, Yanyun|Liu, Yongjun|Li, Feng|
11 Mechanisms of Silicon Alkoxide Hydrolysis–Oligomerization Reactions: A DFT Investigation 期刊论文 Xueli Cheng|Dairong Chen|Yongjun Liu|
12 A QM/MM study of the catalytic mechanism of nicotinamidase 期刊论文 Xiang Sheng|Yongjun Liu|
13 Theoretical studies on the interaction of biphenyl inhibitors with Mycobacterium tuberculosis protein tyrosine phosphatase MptpB 期刊论文 Lihua Dong|Junyou Shi|Yongjun Liu|
14 A Density Functional Theory Study on the Catalytic Mechanism of Hydroxycinnamoyl-CoA Hydratase-Lyase 期刊论文 Li, Yulin|Wei, Lixin|Liu, Yongjun|Liu, Chengbu|
15 Molecular dynamics simulations of the coenzyme induced conformational changes of Mycobacterium tuberculosis l-alanine dehydrogenase 期刊论文 Min Sun|Siwei Bi|Zhihong Jing|Yongjun Liu*|
16 Theoretical study on the proton shuttle mechanism of saccharopine dehydrogenase 期刊论文 Sheng, Xiang|Gao, Jun|Liu, Yongjun|Liu, Chengbu|
17 X-ray crystallography and QM/MM investigation on the oligosaccharide synthesis mechanism of rice BGlu1 glycosynthases 期刊论文 Wang, Jinhu|Pengthaisong, Salila|Cairns, James R. Ketudat|Liu, Yongjun|
18 QM/MM study on the catalytic mechanism of cyclohexane-1,2- dione hydrolase (CDH) 期刊论文 Wenyou Zhu|Yongjun Liu|
19 Theoretical study of the catalytic mechanism of E1 subunit of pyruvate dehydrogenase multienzyme complex from bacillus stearothermophilus 期刊论文 Xiang Sheng|Yongjun Liu|
20 Theoretical investigatins on the synthesis mechansim of cyanuric acid from NH3 and CO2 期刊论文 Xueli Cheng|Yanyun Zhao|Weiqun Zhu|Yongjun Liu|
21 Water Promoting Electron Hole Transport between Tyrosine and Cysteine in Proteins via a Special Mechanism: Double Proton Coupled Electron Transfer 期刊论文 Yanfang Zhang|Xin Qin|Yongjun Liu|Yuxiang Bu|
22 A Density Functional Theory Study on the Catalytic Mechanism of Hydroxycinnamoyl-CoA Hydratase-Lyase 期刊论文 Guangcai Ma, Yulin Li, Lixin Wei, Yongjun Liu*, Ch|
23 Uncoupled Epimerization and Desaturation by Carbapenem Synthase: Mechanistic Insights from QM/MM Studies 期刊论文 Wenyou Zhu|Hao Su|Na Cheng|Yongjun Liu|
24 QM/MM investigation on the catalytic mechanism of Bacteroides thetaiotaomicron alpha -glucosidase BtGH97a 期刊论文 Xiang Sheng|Yi Zhao|Yongjun Liu|Chengbu Liu|
25 Theoretical study of the hydrolysis mechanism of2-pyrone-4,6-dicarboxylate (PDC) catalyzed by LigI 期刊论文 Shujun Zhang|Guangcai Ma|Yongjun Liu|Baoping Ling|
26 QM/MM study o f the conversion mechanism of lysine to methylornithine catalyzed by methylonitine sythase (PyiB) 期刊论文 Wenyou Zhu|Yongjun Liu|Rui Zhang|
27 Ring Contraction Catalyzed by the Metal-Dependent Radical SAM Enzyme: 7?Carboxy-7-deazaguanine Synthase from B. multivorans. Theoretical Insights into the Reaction Mechanism and the In?uence of Metal Ions 期刊论文 Wenyou Zhu|Yongjun Liu|
28 A QM/MM study of the catalytic mechanism of a-1,4-glucan lyase from the red seaweed Gracilariopsis lemaneiformis 期刊论文 Hao Su|Lihua Dong|Yongjun Liu|
29 Insights into the catalytic mechanism of dTDP-glucose 4,6-dehydratase from quantum mechanics/molecular mechanics simulations 期刊论文 Guangcai Ma|Lihua Dong|Yongjun Liu|
30 A theoretical study on the halogen bonding interactions of C6F5I with a series of group 10 metal monohalides 期刊论文 Cheng, Na|Liu, Yongjun|Zhang, Changqiao|Liu, Chengbu|
31 Theoretical study on the proton shuttle mechanism of saccharopine 期刊论文 Xiang Sheng|Jun Gao|Yongjun Liu|Chengbu Liu|
32 Theoretical study on the degradation of ADP-ribose polymer catalyzed by poly(ADP-ribose) glycohydrolase 期刊论文 Hu, Xin|Sheng, Xiang|Liu, Yongjun|Liu, Chengbu|
33 羰基化合物在Si(100)表面[2+2]环加成和α-H裂解反应的选择性(英文) 期刊论文 程玉桥|孟祥华|刘永军*|刘成卜|
34 A QM/MM study of the catalytic mechanism of succinic semialdehyde dehydrogenase from Synechococcus sp. PCC 7002 and Salmonella typhimurium 期刊论文 Jing Zhang|Yongjun Liu|
35 QM/MM studies of the mechanism of unusual bifunctional fructose-1,6-bisphosphate aldolase/phosphatase 期刊论文 Qianqian Hou|Xiang Sheng|Yongjun Liu|
36 Theoretical studies on the common catalytic mechanism of transketolase by using simpli?ed models 期刊论文 Xiang Sheng|Yongjun Liu|Chengbu Liu|
37 Theoretical study on copper-catalyzed reaction of hydrosilane, alkyne and carbon dioxide: A hydrogencarboxylation or hydrosilylation process? 期刊论文 Yi zhao|Yuxia Liu|Siwei Bi|Yongjun Liu|
38 Computational studies on the catalytic mechanism of phosphoketolase 期刊论文 Jing Zhang|Yongjun Liu|
39 The structures and properties of halogen bonds involving polyvalent halogen in complexes of FXOn (X = Cl, Br; n = 0–3)–CH3CN 期刊论文 Fuzhen Bi|Yongjun Liu|Changqiao Zhang|Chengbu Liu|
40 Theoretical study on the deglycosylation mechanism of rice BGlu1 beta-glucosidase 期刊论文 Sheng, Xiang|Gao, Jun|Liu, Yongjun|Liu, Chengbu|
41 QM/MM study of the mechanism of enzymatic limonene 1,2-epoxide hydrolysis 期刊论文 X. Sheng|J.H. Wang|Y.J. Liu|C.B. Liu|
42 QM/MM Study of the Reaction Mechanism of the Carboxyl Transferase Domain of Pyruvate Carboxylase from Staphylococcus aureus 期刊论文 Xiang Sheng|Yongjun Liu|
43 A QM/MM study of the catalytic mechanism of aspartate ammonia lyase 期刊论文 Jing Zhang|Yongjun Liu|
44 Mechanistic investigations of Al(OH)(3) oligomerization mechanisms 期刊论文 Cheng, Xueli|Ding, Wenchao|Liu, Yongjun|Chen, Dairong|
45 Methanolysis of Si(OCH3)4 and Al(OCH3)3 alkoxide: A comparative study with DFT method 期刊论文 Xueli Cheng|Guofang He|Liqing Li|Yongjun Liu|
46 Theoretical investigation on the regioselectivity of Ni(COD)2-catalyzed [2 t 2 t 2] cycloaddition of unsymmetric diynes and CO2 期刊论文 Yi Zhao|Yuxia Liu|Siwei Bi|Yongjun Liu|
47 QM/MM studies on the catalytic mechanism of Phenylethanolamine N-methyltransferase 期刊论文 J.H. Wang|J. Gao|Y.J. Liu|C.B. Liu|
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