【91130033】海量蛋白质数据的复杂特征建模及高效学习算法国家自然基金项目

海量蛋白质数据的复杂特征建模及高效学习算法

项目批准号： 91130033

批准年份： 2011

学科分类： F0124.生物电子学与生物信息处理

项目负责人：沈红斌

资助类别：重大研究计划

负责人职称：教授

依托单位：上海交通大学

资助金额： 70万元

关键词：蛋白质组学;生物信息;脂肪细胞分化;代谢疾病;计算智能

起止时间： 2012-01-01到2014-12-31

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序号	标题	类型	作者
1	Improving accuracy of protein contact prediction using balanced network deconvolution	期刊论文	Yang Zhang\|Yang Zhang\|Hong-Bin Shen\|Hong-Bin Shen\|
2	Prediction and early diagnosis of complex diseases by edge-network	期刊论文	Yu, Xiangtian\|Li, Guojun\|Chen, Luonan\|
3	Network biomarkers reveal dysfunctional gene regulations during disease progression	期刊论文	Zeng, Tao\|Sun, Shao-yan\|Wang, Yong\|Zhu, Hailong\|Chen, Luonan\|
4	TargetATPsite: A template-free method for ATP-binding sites prediction with residue evolution image sparse representation and classifier ensemble	期刊论文	Tang, Zhen-Min\|Tang, Zhen-Min\|Yang, Jing-Yu\|Yang, Jing-Yu\|
5	Glocal: Reconstructing Protein 3D Structure from 2D Contact Map by Combining Global and Local Optimization Schemes	期刊论文	Chen, Jun\|Shen, Hong-Bin\|
6	Adaptive firefly algorithm: parameter analysis and its application	期刊论文	Xue-Ming Ding\|Xue-Ming Ding\|Hong-Bin Shen\|Hong-Bin Shen\|
7	Learning protein multi-view features in complex space	期刊论文	Yang, Jian\|Yang, Jian\|Yang, Jing-Yu\|Yang, Jing-Yu\|
8	Predicting protein-ATP binding sites from primary sequence through fusing bi-profile sampling of multi-view features	期刊论文	Shu-Sen Li\|Yong-Xian Fan\|Yan Huang\|Hong-Bin Shen\|
9	Revealing the Hidden Relationship by Sparse Modules in Complex Networks with a Large-Scale Analysis	期刊论文	Liu, Wei\|Wang, Xiao-Fan\|Chen, Xiao-Shuang\|Shen, Hong-Bin\|
10	A New Supervised Over-Sampling Algorithm with Application to Protein-Nucleotide Binding Residue Prediction	期刊论文	Yang, Jing-Yu\|Yang, Jing-Yu\|Shen, Hong-Bin\|Shen, Hong-Bin\|
11	Predicting pupylation sites in prokaryotic proteins using pseudo-amino acid composition and extreme learning machine	期刊论文	Fan, Yong-Xian\|Fan, Yong-Xian\|Shen, Hong-Bin\|Shen, Hong-Bin\|
12	Predicting pupylation sites in prokaryotic proteins using pseudo-amino acid composition and extreme learning machine	期刊论文	Yong-Xian Fan\|Yong-Xian Fan\|Hong-Bin Shen\|Hong-Bin Shen\|
13	LabCaS: Labeling calpain substrate cleavage sites from amino acid sequence using conditional random fields	期刊论文	Zhang, Yang\|Zhang, Yang\|Shen, Hong-Bin\|Shen, Hong-Bin\|
14	Deciphering early development of complex diseases by progressive module network	期刊论文	Zeng, Tao\|Zhang, Chuan-chao\|Zhang, Wanwei\|Liu, Rui\|Liu, Juan\|Chen, Luonan\|
15	GFO: A data driven approach for optimizing the Gaussian function based similarity metric in computational biology	期刊论文	J.B. Lei\|J.B. Yin\|H.B. Shen\|
16	MCentridFS: a tool for identifying module biomarkers for multi-phenotypes from high-throughput data	期刊论文	Wen, Zhenshu\|Zhang, Wanwei\|Zeng, Tao\|Chen, Luonan\|
17	STK31(TDRD8) is dynamically regulated throughout mouse spermatogenesis and interacts with MIWI protein	期刊论文	Liu Yue\|Shen Hong-Bin\|Yan Wei\|Xu Chen\|
18	Bioimaging based detection of mislocalized proteins in human cancers by semi-supervised learning	期刊论文	Yang Zhang\|Yang Zhang\|Hong-Bin Shen\|Hong-Bin Shen\|
19	An image-based multi-label human protein subcellular localization predictor (iLocator) reveals protein mislocalizations in cancer tissues	期刊论文	Zhang, Yang\|Zhang, Yang\|Shen, Hong-Bin\|Shen, Hong-Bin\|
20	Many Local Pattern Texture Features: Which Is Better for Image-Based Multilabel Human Protein Subcellular Localization Classification?	期刊论文	Xu, Ying-Ying\|Xu, Ying-Ying\|Shen, Hong-Bin\|Shen, Hong-Bin\|
21	MACOED: A multi-objective ant colony optimization algorithm for SNP epistasis detection in genome-wide association studies	期刊论文	Peng-Jie Jing\|Peng-Jie Jing\|Hong-Bin Shen\|Hong-Bin Shen\|

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