基于RNA-seq数据识别胚胎发育相关的lncRNA及新候选lncRNA的鉴定及功能研究
31371478
2013
C1204.组织器官发育及体外构建
吴琼
面上项目
教授
哈尔滨工业大学
80万元
计算生物学;长非编码RNA;高通量;胚胎发育;表观基因组
2014-01-01到2017-12-31
- 中英文摘要
- 结题摘要
- 结题报告
- 项目成果
- 项目参与人
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| 序号 | 标题 | 类型 | 作者 |
|---|---|---|---|
| 1 | MetaImprint: an information repository of mammalian imprinted genes | 期刊论文 | Wei Yanjun; Su Jianzhong; Liu Hongbo; Lv Jie; Wang Fang; Yan Haidan; Wen Yanhua; Liu Hui; Wu Qiong; Zhang Yan |
| 2 | Aquaporin-1, a New Maternally Expressed Gene, Regulates Placental Development in the Mouse | 期刊论文 | Guo Jing; He Hongjuan; Liu Hui; Liu Qi; Zhang Lili; Liu Boqi; Sugimoto Kenkichi; Wu Qiong |
| 3 | Chromatin modifications and genomic contexts linked to dynamic DNA methylation patterns across human cell types | 期刊论文 | Yan Haidan; Zhang Dongwei; Liu Hongbo; Wei Yanjun; Lv Jie; Wang Fang; Zhang Chunlong; Wu Qiong; Su Jianzhong; Zhang Yan |
| 4 | Computational identification of putative lincRNAs in mouse embryonic stem cell | 期刊论文 | Liu Hui;Lyu Jie;Liu Hongbo;Gao Yang;Guo Jing;He Hongjuan;Han Zhengbin;Zhang Yan;Wu Qiong |
| 5 | Identification of 4438 novel lincRNAs involved in mouse pre-implantation embryonic development | 期刊论文 | J. Lv; H. Liu; S. Yu; W. Cui; Y. Gao; T. Zheng; G. Qin; J. Guo; T. Zeng; Z. Han; Y. Zhang; Q. Wu |
| 6 | Identification and characterization of long intergenic non-coding RNAs related to mouse liver development | 期刊论文 | J. Lv; Z. Huang; H. Liu; W. Cui; B. Li; H. He; J. Guo; Q. Liu; Y. Zhang; Q. Wu |
| 7 | Aquaporin-1, a New Maternally Expressed Gene, Regulates Placental Development in the Mouse. | 期刊论文 | Jing Guo;Hongjuan He;Hui Liu;Qi Liu;Lili Zhang;Boqi Liu;Kenkichi Sugimoto;Qiong Wu |
| 8 | Spatiotemporal expression of retrogene-host pair Mcts2/H13 in mouse embryo, and Mcts2 has no influence on H13 transcription pattern in NIH/3T3 cells | 期刊论文 | Huang Zhijun; Han Zhengbin; Zhang Fengwei; He Hongjuan; Yu Shihuan; Wu Qiong |
| 9 | Dynamic expression pattern of Pde4d and its relationship with CpG methylation in the promoter during mouse embryo development | 期刊论文 | Zhijun Huang; Zhengbin Han; Wei Cui; Fengwei Zhang; Hongjuan He; Tiebo Zeng; Kenkichi Sugimoto; Qiong Wu |
| 10 | Quantitative epigenetic co-variation in CpG islands and co-regulation of developmental genes | 期刊论文 | Liu Hongbo; Chen Yanjun; Lv Jie; Liu Hui; Zhu Rangfei; Su Jianzhong; Liu Xiaojuan; Zhang Yan; Wu Qiong |
| 11 | Long non-coding RNA identification over mouse brain development by integrative modeling of chromatin and genomic features | 期刊论文 | Lv Jie; Liu Hongbo; Huang Zhijun; Su Jianzhong; He Hongjuan; Xiu Youcheng; Zhang Yan; Wu Qiong |
| 12 | DNA methylation dynamics of a maternally methylated DMR in the mouse Dlk1-Dio3 domain | 期刊论文 | Zeng Tie-Bo;He Hong-Juan;Han Zheng-Bin;Zhang Feng-Wei;Huang Zhi-Jun;Liu Qi;Cui Wei;Wu Qiong |
| 13 | MiR-1188 at the imprinted Dlk1-Dio3 domain acts as a tumor suppressor in hepatoma cells | 期刊论文 | Cui Wei; Huang Zhijun; He Hongjuan; Gu Ning; Qin Geng; Lv Jie; Zheng Tao; Sugimoto Kenkichi; Wu Qiong |
| 14 | Detection of type 2 diabetes related modules and genes based on epigenetic networks | 期刊论文 | Liu Hui; Wang Tongtong; Liu Hongbo; Wei Yanjun; Zhao Guofeng; Su Jianzhong; Wu Qiong; Qiao Hong; Zhang Yan |
| 15 | DevMouse, the mouse developmental methylome database and analysis tools | 期刊论文 | Liu Hongbo; Zhu Rangfei; Lv Jie; He Hongjuan; Yang Lin; Huang Zhijun; Su Jianzhong; Zhang Yan; Yu Shihuan; Wu Qiong |
| 16 | Systematic identification and annotation of human methylation marks based on bisulfite sequencing methylomes reveals distinct roles of cell type-specific hypomethylation in the regulation of cell identity genes | 期刊论文 | Liu Hongbo;Liu Xiaojuan;Zhang Shumei;Lv Jie;Li Song;Shang Shipeng;Jia Shanshan;Wei Yanjun;Wang Fang;Su Jianzhong;Wu Qiong;Zhang Yan |
| 17 | Identification and Epigenetic Analysis of a Maternally Imprinted Gene Qpct | 期刊论文 | Guo Jing; He Hongjuan; Liu Qi; Zhang Fengwei; Lv Jie; Zeng Tiebo; Gu Ning; Wu Qiong |
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