基于质谱大数据的蛋白质羟基化位点鉴定及功能分析

31770821
2017
C0505.蛋白质、多肽与酶生物化学
李磊
面上项目
教授
青岛大学
60万元
修饰蛋白质组分析;多肽合成;计算蛋白质组学;修饰测定;高通量检测
2018-01-01到2021-12-31
  • 中英文摘要
  • 结题摘要
  • 结题报告
  • 项目成果
  • 项目参与人
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序号 标题 类型 作者
1 BERMP: a cross-species classifier for predicting m(6)A sites by integrating a deep learning algorithm and a random forest approach 期刊论文 Huang Yu;He Ningning;Chen Yu;Chen Zhen;Li Lei
2 DeepSADPr: A Hybrid-learning Architecture for Serine ADP-ribosylation site prediction 期刊论文 Yutong Sha;Chenglong Ma;Xiling Wei;Yuhai Liu;Yu Chen;Lei Li
3 Revisiting the phosphotyrosine binding pocket of Fyn SH2 domain led to the identification of novel SH2 superbinders. 期刊论文 Li Shuhao;Zou Yang;Zhao Dongping;Yin Yuqing;Song Jingyi;He Ningning;Liu Huadong;Qian Dongmeng;Li Lei;Huang Haiming
4 Integration of A Deep Learning Classifier with A Random Forest Approach for Predicting Malonylation Sites 期刊论文 Chen Zhen;He Ningning;Huang Yu;Qin Wen Tao;Liu Xuhan;Li Lei
5 Identification and characterization of a large family of superbinding bacterial SH2 domains 期刊论文 Kaneko Tomonori;Stogios Peter J.;Ruan Xiang;Voss Courtney;Evdokimova Elena;Skarina Tatiana;Chung Amy;Liu Xiaoling;Li Lei;Savchenko Alexei;Ensminger Alexander W.;Li Shawn S. -C.
6 DeepCSO: A Deep-Learning Network Approach to Predicting Cysteine S-Sulphenylation Sites 期刊论文 Lyu Xiaru;Li Shuhao;Jiang Chunyang;He Ningning;Chen Zhen;Zou Yang;Li Lei
7 DeepKcrot: A Deep-Learning Architecture for General and Species-Specific Lysine Crotonylation Site Prediction 期刊论文 Wei Xilin;Sha Yutong;Zhao Yiming;He Ningning;Li Lei
8 DeepKhib: A Deep-Learning Framework for Lysine 2-Hydroxyisobutyrylation Sites Prediction 期刊论文 Zhang Luna;Zou Yang;He Ningning;Chen Yu;Chen Zhen;Li Lei
9 MMS2plot: An R Package for Visualizing Multiple MS/MS Spectra for Groups of Modified and Non-Modified Peptides 期刊论文 Ming Liya;Zou Yang;Zhao Yiming;Zhang Luna;He Ningning;Chen Zhen;Li Shawn S. -C.;Li Lei
10 Development of an experiment-split method for benchmarking the generalization of a PTM site predictor: Lysine methylome as an example 期刊论文 Guoyang Zou;Yang Zou;Chenglong Ma;Jiaojiao Zhao;Lei Li
11 y Identification of Protein Lysine Crotonylation Sites by a Deep Learning Framework With Convolutional Neural Networks 期刊论文 Zhao Yiming;He Ningning;Chen Zhen;Li Lei
12 Large-scale comparative assessment of computational predictors for lysine post-translational modification sites 期刊论文 Zhen Chen;Xuhan Liu;Fuyi Li;Chen Li;Tatiana Marquez-Lago;André Leier;Tatsuya Akutsu;Geoffrey I Webb;Dakang Xu;Alexander Ian Smith;Lei Li;Kuo-Chen Chou;Jiangning Song
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