高通量快速检测含有杂合基因型关联群体的多位点GWAS方法学研究及其软件包研制

31871242
2018
C0606.群体遗传与数量遗传
章元明
面上项目
教授
华中农业大学
59万元
遗传群体;全基因组关联分析;品种资源;作物;基因非加性效应
2019-01-01到2022-12-31
  • 中英文摘要
  • 结题摘要
  • 结题报告
  • 项目成果
  • 项目参与人
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序号 标题 类型 作者
1 A combinatorial strategy to identify various types of QTLs for quantitative traits using extreme phenotype individuals in F2 期刊论文 Pei Li;Guo Li;Ya-Wen Zhang;Jian-Fang Zuo;Jin-Yang Liu;Yuan-Ming Zhang
2 Editorial: The applications of new multi-locus GWAS methodologies in the genetic dissection of complex traits 期刊论文 Zhang Yuan-Ming;Jia Zhenyu;Jim M. Dunwell
3 dQTG.seq: A comprehensive R tool for detecting all types of QTLs using extreme phenotype individuals in bi-parental segregation populations 期刊论文 Pei Li;Liu-Qiong Wei;Yi-Fan Pan;Yuan-Ming Zhang
4 The improved FASTmrEMMA and GCIM algorithms for genome-wide association and linkage studies in large mapping populations 期刊论文 Yangjun Wen;Yawen Zhang;Jin Zhang;Jianying Feng;Yuanming Zhang
5 mrMLM v4.0.2: An R platform for multi-locus genome-wide association studies 期刊论文 Ya-Wen Zhang;Cox Lwaka Tamba;Yang-Jun Wen;Pei Li;Wen-Long Ren;Yuan-Li Ni;Jun Gao;Yuan-Ming Zhang
6 Effect of marker segregation distortion on high density linkage map construction and QTL mapping in soybean (Glycine max L.) 期刊论文 Zuo Jian Fang;Niu Yuan;Cheng Peng;Feng Jian Ying;Han Shi Feng;Zhang Ying Hao;Shu Guoping;Wang Yibo;Zhang Yuan Ming
7 Three-dimensional genetic networks among seed oil-related traits, metabolites and genes reveal the genetic foundations of oil synthesis in soybean 期刊论文 Jin-Yang Liu;Pei Li;Ya-Wen Zhang;Jian-Fang Zuo;Guo Li;Xu Han;Jim M. Dunwell;Yuan-Ming Zhang
8 An integrated omics analysis reveals molecular mechanisms that are associated with differences in seed oil content between Glycine max and Brassica napus 期刊论文 Zhang Zhibin;Dunwell Jim M.;Zhang Yuan-Ming
9 An evolutionary population structure model reveals pleiotropic effects of GmPDAT for traits related to seed size and oil content in soybean 期刊论文 Jin-Yang Liu;Ya-Wen Zhang;Xu Han;Jian-Fang Zuo;Zhibin Zhang;Haihong Shang;Qijian Song;Yuan-Ming Zhang
10 Integrated bioinformatics analyses of PIN1, CKX, and yield-related genes reveals the molecular mechanisms for the difference of seed number per pod between soybean and cowpea 期刊论文 Lü-Meng Liu;Han-Qing Zhang;Kun Cheng;Yuan-Ming Zhang
11 A compressed variance component mixed model framework for detecting small and linked QTL-by-environment interactions 期刊论文 Ya-Hui Zhou;Guo Li;Yuan-Ming Zhang
12 Integrated transcriptomic and bioinformatics analyses reveal the molecular mechanisms for the differences in seed oil and starch content between Glycine max and Cicer arietinum 期刊论文 Kun Cheng;Yi-Fan Pan;Lü-Meng Liu;Han-Qing Zhang;Yuan-Ming Zhang
13 IIIVmrMLM: the R and C++ tools associated with 3VmrMLM, a comprehensive GWAS method for dissecting quantitative traits 期刊论文 Mei Li;Ya-Wen Zhang;Yu Xiang;Ming-Hui Liu;Yuan-Ming Zhang
14 A compressed variance component mixed model for detecting QTNs, and QTN-by-environment and QTN-by-QTN interactions in genome-wide association studies 期刊论文 Mei Li;Ya-Wen Zhang;Ze-Chang Zhang;Yu Xiang;Ming-Hui Liu;Ya-Hui Zhou;Jian-Fang Zuo;Han-Qing Zhang;Ying Chen;Yuan-Ming Zhang
15 DNA N6-methyladenine modification in wild and cultivated soybeans reveals different patterns in nucleus and cytoplasm 期刊论文 De-Hui Yuan;Jian-Feng Xing;Mei-Wei Luan;Kai-Kai Ji;Jun Guo;Shang-Qian Xie;Yuan-Ming Zhang
16 Domestication and improvement genes reveal the differences of seed size- and oil-related traits in soybean domestication and improvement 期刊论文 Jian-Fang Zuo;Muhammad Ikram;Jin-Yang Liu;Chun-Yu Han;Yuan Niu;Jim M. Dunwell;Yuan-Ming Zhang
17 Identification of QTNs and their candidate genes for flowering time and plant height in soybean using multi-locus genome-wide association studies 期刊论文 Xu Han;Zhuo-Ran Xu;Ling Zhou;Chun-Yu Han;Yuan-Ming Zhang
18 QTL.gCIMapping.GUI v2.0: An R software for detecting small-effect and linked QTLs for quantitative traits in bi-parental segregation populations 期刊论文 Ya-Wen Zhang;Yang-Jun Wen;Jim M. Dunwell;Yuan-Ming Zhang
19 Identification of QTNs and their candidate genes for 100-seed weight in soybean (Glycine max L.) using multi-locus genome-wide association studies 期刊论文 Ikram Muhammad;Han Xu;Zuo Jian-Fang;Song Jian;Han Chun-Yu;Zhang Ya-Wen;Zhang Yuan-Ming
20 Identification of QTN-by-environment interactions and their candidate genes for soybean seed oil-related traits using 3VmrMLM 期刊论文 Jian-Fang Zuo;Ying Chen;Chao Ge;Jin-Yang Liu;Yuan-Ming Zhang
21 Integration of RNA-Seq profiling with genome-wide association study predicts candidate genes for oil accumulation in soybean 期刊论文 Yuan Niu;Guoliang Zhang;Faxiang Wan;Yuan-Ming Zhang
22 4D genetic networks reveal the genetic basis of metabolites and seed oil-related traits in 398 soybean RILs 期刊论文 Xu Han;Ya-Wen Zhang;Jin-Yang Liu;Jian-Fang Zuo;Ze-Chang Zhang;Liang Guo;Yuan-Ming Zhang
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